Selaginella moellendorffii: SELMODRAFT_96899
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Entry
SELMODRAFT_96899 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_96899
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
SELMODRAFT_96899
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SELMODRAFT_96899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
9650347
NCBI-ProteinID:
XP_002972161
JGI:
96899
UniProt:
D8RL74
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MAVERRKSTPGRGGVVQQRLSEDEARVRAIAEIVGAMVEGCRNGEDVDLNALKSAACRRY
GLARAPKLVEMIAALPENERDLVLPRLKAKPVRTASGIAVVAVMSKPHRCPHIATTGNIC
VYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQARGRVDQLRRLGHSVDKVEYIL
MGGTFMSLPADYRDYFIRNLHDALSGHTSRDVEEAVRYSEHAAIKCIGLTIETRPDYCLS
PHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVGAVADCFCLAKDAGFKVVAHMMPNL
PNVDMERDMESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYKNYPPEQLVNLV
ARVLSLVPPWTRVYRIQRDIPMPLVTSGVEKGNLRELALMRMEDLGLKCRDVRTREAGIQ
DIHNQIKPEEVELVRRDYCANKGWETFLAYEDTRQDILVGLLRLRKCGPNATCPELLGRC
SIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARKEHRSVKLAVISGVGTRHY
YRKLGYELEGPYMTKRL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggagcgcaggaaatcgacaccgggacggggaggcgtcgtccagcagcggctg
agcgaggacgaggccagggtacgcgcaattgcggagattgtaggggctatggtggaagga
tgccgcaacggtgaggacgtcgatctcaatgcgctcaaatccgctgcttgccgccgctac
ggccttgcccgagcgccaaagctcgtggagatgatcgcggcgttgccagagaatgagcgc
gatctcgtcctgcccaggctcaaggccaagcctgtgcgcactgcctctgggattgccgtg
gttgcggtcatgtccaagcctcatcggtgcccacacatcgccacgactgggaatatctgt
gtctactgcccgggaggcccagattcggacttcgaatatagcacacagtcctacactggg
tatgaaccaacgagcatgcgagcaattcgagcaaggtacaatccttatatacaggctcga
ggtcgagtggatcaactcaggcgtctgggccatagcgtggataaggttgaatatatcctt
atgggaggtactttcatgtctttgccagcagactaccgcgactattttatccgaaatctc
catgacgctctgtctggtcacacctctcgagatgtggaggaagccgtgagatactcagag
catgctgccatcaagtgcattggactgaccattgagacgcgtcccgactactgtctgtct
cctcacttgcgccagatgttgtcttatggctgtacgcggcttgagattggggtgcagagc
acgtacgaagatgtcgctcgagatactaaccggggccatacggttggtgctgttgctgac
tgcttttgccttgccaaggacgctggctttaaggtggttgctcatatgatgcctaacctt
ccaaacgtcgatatggaacgggacatggaaagcttccgcgagttttttgaaaatccttcc
tttcgagcggacggcctcaaaatctatccaacgctggttattcgagggacaggtttgtac
gagctatggaagactggaaggtacaagaactatccacctgaacaactcgtcaatctggtt
gcccgagtgttgtctctggtacctccctggactcgggtctatcgcatacaacgtgacatc
cccatgcctcttgtaacgtcgggcgtcgagaagggaaacctgcgagagctggcgttgatg
aggatggaggacttgggcttgaaatgtagagatgtcaggacaagagaagctgggattcag
gatatacacaatcaaatcaagcctgaagaagtagagctagtaaggcgtgactactgtgct
aacaaaggctgggagacgtttctggcctatgaagacactagacaggatatactggtgggt
ttactgcgcctgagaaaatgcggtcccaacgctacatgccccgagctgctgggacgatgt
tcgatagttcgcgagctgcacgtttatggaactgcggtgcctgttcacggccgtgacgcc
gacaagctacaacaccagggttatggaactcttttgatggaagaagccgagaggatagct
cgcaaggagcatcgatccgtgaaactggcagtgatatccggagtgggaactagacactac
tacaggaaactaggctatgagctagaaggtccctacatgacgaaaagattgtaa
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