Selaginella moellendorffii: SELMODRAFT_98090
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Entry
SELMODRAFT_98090 CDS
T01496
Symbol
SINAT5B-1
Name
(RefSeq) hypothetical protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_98090 (SINAT5B-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_98090 (SINAT5B-1)
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_98090 (SINAT5B-1)
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
SELMODRAFT_98090 (SINAT5B-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
9636961
NCBI-ProteinID:
XP_002973058
JGI:
98090
UniProt:
D8RPM6
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MSPGTIYLDVPESPSLDSTETTADADVVAVAAAGSAASSVGASSAPPSASCGSSKSCSKS
TSSVHELLECPVCTNSMYPPIHQCPNGHTLCSTCKVRVHNRCPTCRYELGNIRCLALEKV
AESLELPCRYQGLGCPDIFPYYSKLKHEAQCCFRPYGCPYAGSECSVSGNIPTLVAHLRD
DHKVDMHNGCTFNHRYVKSNPQEVENATWMLTVFNCYGQHFCLHFEAFQLGTMPVYMAFL
RFMGDDNDAKNFSYSLEVGANGRKLMWQGVPRSIRDCHKKVRDSHDGLIIQRNMALFFSG
GDRKELKLRVTGRIWREQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgggacgatctacctcgatgtcccggagtcgccatcgctcgatagcacagaa
accacggccgatgccgatgtggtagcagtagcagcggcggggtcagcggcgtcgtcggta
ggagcatcctccgcgcctccctcggcctcttgcggatcatccaagtcgtgctccaaatct
actagcagcgtccacgagctccttgaatgcccggtttgcacgaactcgatgtatcctccc
atccaccagtgtccaaatggccacactctgtgctctacttgtaaagtccgcgtccacaat
cgctgcccaacttgccgatacgagctgggaaacattcgctgcttggctctggagaaggtt
gccgaatcgctggaacttccttgtaggtaccagggacttggatgccccgacatctttcca
tactacagcaagctcaagcacgaagcgcagtgttgcttccggccttacggctgcccctac
gcgggatccgagtgctccgtgagtggcaacattccaacgctggttgctcacttgcgcgac
gatcacaaggtggacatgcacaatggttgcaccttcaaccatcgctacgtcaagtccaat
ccacaggaagtcgagaatgctacctggatgctcacggttttcaactgttatggacagcac
ttctgcctacactttgaggcgttccagctcgggacaatgccagtttacatggcttttctg
agattcatgggggacgacaacgatgccaagaacttcagctacagcctcgaggtaggcgcc
aatggcaggaaattgatgtggcagggtgtcccgagaagcattcgggactgccacaagaaa
gtgagggacagccatgacggattgataatccagagaaacatggcattgtttttctccggg
ggtgacaggaaggagctaaagctgagggtgacaggcagaatttggagggagcagtaa
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