Selaginella moellendorffii: SELMODRAFT_98227
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Entry
SELMODRAFT_98227 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_98227
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_98227
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SELMODRAFT_98227
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SELMODRAFT_98227
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SELMODRAFT_98227
microRNA pathway
RISC loading complex
SELMODRAFT_98227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9637255
NCBI-ProteinID:
XP_002972915
JGI:
98227
UniProt:
D8RNT3
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MPPRRGGGRGGGRGGGDGRAPSQEWRGQGEEFQQGRGRGRGGRNPDGRGQGGREGGGGRG
AGAGGGGPSQAPIEAFPPLGGRRQQQIPPETSQRPRQSASADSLVPRVKDLDVKETPAGP
SAPVPSSSTGDVPTSSKALAPPKRPDRGTVGQKVTIRVNHFKMKVKDGPIFHYDVSIHPA
VGSKGIARALERQLVSQYRASELNNLLPVYDGSKSLYTAGPLPFEQKDFKVTLPAEEEGR
RTREFKVTIKFAAKLDQYQMDLFLEGRGAVLQAPYEFLQALDVALREWPMKSYVPSGRNF
FDPSFGRLALEGGFEAWKGFYQSVRPTMQGLVLNVDLSAAAFYEALPVLEFLKKSLPYFD
PSRGLSDGDRAKAKNLLNRLKVEVTHRNIPRRYRISGLSLRPTKALTFTTDSGQEVKVVD
YFWTTYKHKIQYPELPCLELQGRKTTYLPMEVCKLAAGQKYQGKLNERQTTNMLRFTCQI
PAVREQNIKTLMSNVQDFQRNDYAAEFGIQVAKSMTSLHARVLPTPSLRYSSNRITPSDG
GWNMMRSRFLRGGVIRRWTLVNFARLARQDVDAFISELITRCAAVGVQMDPPVIPPSSGR
LEQYDTLLRNAVRNHASKSKPGEGLQLVVCLMDAKHQIYGDLKKLCETELGLVTQVCLKK
NVMKEYNSLSQYLANLAMKINVKVGGQNMDLAQDLRLMVPSILGNPTIIFGADVSHPMAR
DDTSPSISAVVASMDWPSAVKYLARARSQRGRVEMIEHLHDMVVDLMRAFFTHTRLKPER
LLFFRDGVSEGQFSDVLNNEVQAIRRAFLTLQPNGDYCPQITFVVVQKRHHTRFFPADSN
VVSNNVRPGTVVDTEITHPREFDFYLCSHRGLQGTSRPTHYHVLLDQNGFTADQLQTLVN
SLCYTYARCTKAVSVIPPAYYAHLVAYRSRLHVDSVAAGAGSSSARAAAAEYRLPEVLPE
VRDYMYYC
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgcggcggggaggcgggcgaggcggcggacgaggaggaggcgatggacgggcg
ccatcgcaggaatggcgtggtcaaggagaggaatttcagcagggaagaggtagaggtaga
ggcgggagaaatcccgacggtcgcgggcaaggaggaagagagggcggcggcgggcgtgga
gctggagctggaggaggtggtccttctcaagctccgattgaggccttccctccactaggc
ggccgtcggcagcaacaaattcctccagagacctcgcagcggccgcgccagagcgctagt
gccgactcgctggttcctcgagtaaaagatttggacgtgaaggaaactcctgctggcccg
agtgctcccgttcctagcagcagcactggtgatgttcctacctcctcgaaagcacttgca
cctcctaaaaggcctgatcgaggaactgttggacagaaggttaccatcagagtgaaccac
ttcaagatgaaggtgaaagatggacccatctttcactacgacgtatccattcatccggct
gttggctcgaaagggattgctcgtgctctggagcggcagctcgtgtcacagtatcgggct
tcagagctaaacaaccttcttcccgtctacgatggaagcaagagcttgtacacggcgggg
ccacttccgtttgagcagaaggacttcaaagttacgttgccggcagaggaagaagggcgc
aggacccgcgagttcaaagtcacgatcaagtttgccgcgaagctggaccagtatcaaatg
gacctcttcctcgaaggcagaggtgcggtcctacaagccccgtatgagttcttgcaagct
ttggacgtggctttgagagagtggcccatgaagtcgtacgttcccagtggacgtaacttc
ttcgatccgtcattcgggaggctggcactagaaggtggttttgaggcctggaaaggattt
taccagagtgttcgtccaaccatgcaaggcctcgtgctgaacgtcgatttgtctgcagca
gcattttacgaggcattgccagttctcgagttcctcaagaagtcactcccgtacttcgac
ccaagccgaggcttgtcggacggtgatcgagccaaggccaaaaatctcttgaaccggctc
aaggtcgaagtcacgcacaggaacatccctcggagatacaggatttcgggactgtctttg
cggccaacaaaggcgttgacgttcacaactgattctggacaggaggtgaaggttgtggac
tacttttggacgacgtacaagcataagatccagtatcccgagttgccttgcctcgagttg
caaggaaggaaaactacttatctgcctatggaagtgtgcaagctggctgccggtcagaaa
tatcagggaaagctcaacgagaggcagacaacaaacatgctgaggttcacgtgtcagatt
cctgctgttcgagagcagaacataaagactcttatgagcaatgttcaagactttcagcgg
aatgattatgctgcggagtttggaattcaggtggctaagtcgatgacgtctctgcacgca
agggttcttccaactccgagtctgaggtatagcagcaaccggatcacgccatctgatggc
ggctggaacatgatgcggtctaggtttcttcgagggggagtaatccgccgctggactctc
gtcaacttcgcgagattagcaagacaggacgtggatgctttcatcagtgagttgatcacg
cggtgcgcggcggttggagttcagatggatcctcccgtgatccctccttccagcggtcgg
ctggagcagtatgatacgctactccggaatgccgtcaggaatcacgccagcaaaagcaag
cccggggaaggtcttcagctggtagtttgtctcatggacgccaagcaccagatttacggg
gacctgaagaagctgtgcgagacggagctcgggctcgtgacgcaagtgtgccttaagaaa
aatgtgatgaaggagtacaacagtttgtcacagtacctggccaacctcgcgatgaagatc
aacgtcaaagttggaggccagaacatggatctggcgcaggatctgcgactcatggttcca
tcgattctcggcaatccaacaatcatctttggagctgatgtctctcatcccatggctcgc
gacgacacgagtccctccatctccgcggtggtggcgagcatggactggccatcggcggtc
aagtatctcgctcgcgcgagatctcagaggggcagggtggagatgatcgagcacctgcat
gacatggtggtcgacctcatgagggcgtttttcactcacaccagactcaaaccggagagg
cttctcttcttccgggatggtgtgagcgagggccagttctccgacgtcctgaacaacgaa
gtgcaggcaatccggagggcgttccttaccctccagccgaatggcgactactgtccccag
ataactttcgtggtcgtccagaagcgtcaccacacgaggttcttcccggcggacagtaac
gtggtgagcaacaacgtgagaccggggaccgttgtggacacggagatcacccatcctcga
gagttcgacttttacctttgcagccacaggggtctccagggaaccagccggccgacgcac
taccacgtcctgctcgaccagaatggcttcacggccgaccagctccagacgctcgtcaac
agcttatgctacacttatgcccggtgtaccaaggcggtctcggtgatacctccggcgtac
tacgctcacctggtggcctaccggtctcggctccacgtcgacagtgttgccgctggagct
ggatcttcttctgctcgcgctgcggccgcggagtataggctgcctgaggtacttcctgaa
gtccgggactacatgtactactgctga
DBGET
integrated database retrieval system
