Selaginella moellendorffii: SELMODRAFT_99227
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Entry
SELMODRAFT_99227 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_99227
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_99227
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SELMODRAFT_99227
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SELMODRAFT_99227
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SELMODRAFT_99227
microRNA pathway
RISC loading complex
SELMODRAFT_99227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9638214
NCBI-ProteinID:
XP_002973414
JGI:
99227
UniProt:
D8RQ36
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MRRPGYGQQGTPVRLTCNHFAVTLSRGMDVAQYNVSISYADDPNDKVLVEKGANRRVMDK
VRAELGKKLIFDGENTAYVLGDLSFGDKEMEVTLDKAMGASSSSGGPAKKRRADASSYMV
RIKFSTKVDLGILMRKEDLHLSRAQDALRVLDVLVREQAARREYVLLRESYFHQSLGPVK
DVGEGVESWSGYHASFRPCSLGLSLNLADPSTTIVIKPQLVHEFLAEYFDTSPGGIRADH
LTRAKRVLKGIVVQVYTKTRHKIFGFSDEPASSQRFELKEKGADGTFRLNSTTVLQYYQA
RYNETLQFPNLHCVNVGKATRAVYVPMEFCSILPGQRYKRKLSGNQIRRHLDQARLLPSD
RANVINSGITQLLSNSSVELQSLNVKVDSKMMSVQGRVLPAPLLKFGHRDVPVQAGRWNY
NRDVSQPALPVKEWIVVCFNRRKNPFSHQDVSRIANQLKECCVQKGMAVENPGLVLVEDP
SFSEHPGWERVDMMVAKMRKNNPNPGRRPGFVLCLLPSKESDAYAPFKRLFLTKEGIPNQ
CIAPQRNPNNQYLTNVVLKMNAKLGGYNTVLTSEFKKELPKLSYAQTMILGMDVSHGSPF
SHTPSVAAMVGSFDWPRITRYSARVMAQSAKQEAFANIPSMLESLLKNFKNFQGEKGCYP
QQLIVFRDGVSESQFESVLTGELQDIIKTCEGLGIRPKITLVVAQKRHHTRFLPVGQQKK
NVEPGTVVDRDVAHPTNFDFFLCSHFGMLGTSRPTHYIVLYDEIGFTPDEIQMTINNLCY
TYVKSTTAVSVVAPINYAHLAAKKMKNFMSLDGSETGSLSSAATRESAPPAPVLPELQGN
VANTMFFV
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggccgggttatggccaacagggaacgcctgtccgcctcacctgtaaccatttt
gccgtgacgctctctcgaggaatggatgtagcgcaatacaacgtgagtatatcatatgct
gatgatcccaacgacaaggttctcgtcgagaaaggggcgaaccgccgagtaatggacaag
gtccgggccgagcttggaaaaaaactcatttttgacggagagaatacggcgtacgtgctc
ggcgatctctctttcggcgacaaggaaatggaagtcacgctcgacaaagcaatgggagca
tcttcctcgtctgggggccccgcgaaaaagagaagagcggatgccagctcttacatggtg
aggatcaagttctcaaccaaagtggacttgggcatccttatgaggaaggaagatcttcat
ttgtctcgggcgcaagatgcattgagggtccttgacgttcttgttcgcgaacaagccgcc
agaagggagtacgttttactgcgtgagagctactttcatcagtcccttggtccagtaaaa
gatgttggagaaggggtggaaagctggagtggctaccacgctagcttccgaccttgttct
ctgggattatcactgaacttggcagatccgtcgacaacaatcgtcatcaagccccagttg
gtgcacgaatttcttgcggagtatttcgatacatctccaggaggcattcgtgccgatcac
ttgacccgggcgaagagagtgctgaagggaatcgtggtgcaagtttacactaagacgagg
cacaaaatattcggttttagcgatgaaccagcatcctctcaaaggtttgaattgaaagag
aaaggagccgatggcacgtttagactgaattcaacgacagttcttcagtactatcaagct
agatacaacgaaaccttgcaattccccaatttgcactgtgtcaacgtagggaaagccacg
cgagcagtttatgtaccgatggagttctgttcgattctgcctggacaacggtataaaaga
aaactgagcgggaatcagattcgcaggcaccttgaccaagcacgactgctgccgagtgat
cgtgctaatgtgatcaactcgggcattacgcaactactgtcaaattcaagcgtggaattg
cagtccctcaacgtcaaggttgacagcaaaatgatgtcagttcaaggacgtgttcttccg
gcgccattgctcaagtttggacaccgggacgtaccagtccaggctgggaggtggaactac
aaccgcgatgtaagccaacctgcccttcctgtcaaggagtggattgttgtttgctttaac
cgcagaaagaatcctttcagccatcaagacgtttctcggattgctaaccagttgaaggaa
tgttgcgtgcagaagggcatggctgttgagaatcccggtctagtgttggtagaagatcca
agcttctctgagcatccaggttgggaaagggtggatatgatggttgccaagatgcggaag
aataatcctaatcccggtcgtcgtccggggttcgttctctgtcttcttccgagcaaggaa
tcggatgcctacgcgccattcaaacgactctttttgacgaaagaaggaattccgaaccag
tgcatagcgccccagaggaatcccaacaatcaatacctgacgaacgtcgttttgaagatg
aatgcaaagttagggggctacaacacggttttaactagtgaatttaagaaagaattgcca
aagctttcatatgctcaaaccatgatcttgggaatggacgtgtcgcatggatctccattt
tcccacaccccgtcggtcgcggctatggttggctcttttgactggccaaggattacgagg
tactccgctcgcgtgatggcgcaatcggcaaaacaggaagcgttcgccaacattccatcg
atgctggagagcctcctgaagaactttaagaacttccagggcgagaagggttgctaccct
cagcaattgattgtgttcagagatggagtgagtgaatcccagtttgagagcgtcctcacc
ggggaactgcaagacatcatcaagacttgcgaaggtctcggcatcaggccgaagataact
ctggttgtagcacagaaaaggcaccatacgcgtttcttgccggtggggcagcagaaaaag
aatgtcgaacctgggaccgttgtggaccgcgacgtcgcacatcctacgaatttcgacttc
ttcctgtgcagtcacttcggcatgctcggaacaagcaggccgacacactacatcgtgctc
tacgacgagattggtttcacgccggacgagatccaaatgaccatcaacaatctgtgctac
acctacgtcaagagcacgacagcagtatcagtggttgcgccgatcaactacgcgcatctg
gccgcgaagaaaatgaagaactttatgtcgctggacggctccgagacggggtcactttca
tccgccgctaccagagagtcagcaccgccggccccggttttgccagagctccagggcaac
gtcgccaacactatgttcttcgtctag
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