Selaginella moellendorffii: SELMODRAFT_99807
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Entry
SELMODRAFT_99807 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELMODRAFT_99807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_99807
03110 Chaperones and folding catalysts [BR:
smo03110
]
SELMODRAFT_99807
03029 Mitochondrial biogenesis [BR:
smo03029
]
SELMODRAFT_99807
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_99807
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SELMODRAFT_99807
Messenger RNA biogenesis [BR:
smo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SELMODRAFT_99807
Chaperones and folding catalysts [BR:
smo03110
]
Heat shock proteins
HSP60 / Chaperonin
SELMODRAFT_99807
Mitochondrial biogenesis [BR:
smo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SELMODRAFT_99807
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SELMODRAFT_99807
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_99807
Exosomal proteins of breast cancer cells
SELMODRAFT_99807
Exosomal proteins of colorectal cancer cells
SELMODRAFT_99807
Exosomal proteins of bladder cancer cells
SELMODRAFT_99807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
9642613
NCBI-ProteinID:
XP_002973702
JGI:
99807
UniProt:
D8RRA0
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
RFVVRANAKEIAFDQDSRAALQAGIDKLTDAVGVTLGPRGRNVVLDEFGNAKVVNDGVTI
ARAIELPNNMENAGAALIREVASKTNDSAGDGTTTACVLARELIKMGLLSVTSGANPVAI
KKGIDKTVSALIEELKDKSRPVKGREDIKAVATISAGNDDFVGNMIADAIDKVGPDGVLS
IESSSSFETSVDVEEGMEYDRGYISPQFVTNPEKSTVEFDNAKVLVTDQKLTTIKDILSV
LEKTSQKSAPLLLIAEDVSGEALATLVVNKLRGVLNVAATKAPGFGERRKALLQDIAIIT
GAEYIASDLGLKPETATFEQLGTARKVKITNNSTTIIADVASKDEIQARIAQLKKELAET
DSVYDTEKLSERIAKLSGGVAVIKVGAATEVELEDRKLRIEDAKNATFAAIEEGIVPGGG
AAMVHLSASVSKIKQSLQDPEEKIGADIVEKALLSPAALIAHNAGVEGAVVVEKILASEW
EIGYNAMTDVYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAVVVEKPKPKTPAPAA
PQGMTI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
agatttgttgttcgtgccaatgccaaggagattgccttcgaccaggattcgcgagcagca
ttgcaagccgggattgataaattgaccgatgctgttggcgtcacgcttggtcctcgggga
aggaatgtggtgttggatgagtttggaaatgctaaagtcgtcaacgacggtgttacgatt
gctcgagcaattgagcttccaaataacatggaaaatgcgggtgctgctctcatcagagaa
gttgcgagcaaaacgaatgactctgctggcgatggcacgaccaccgcgtgtgtattggca
cgagagctcatcaaaatgggacttttgtccgtgacttcgggagctaatccagtggcaatc
aaaaaaggcattgacaaaactgtctctgccttgattgaggagctcaaggataagtcgagg
ccagtcaagggacgggaagacatcaaagctgtggctactatttctgctggaaacgatgat
tttgttggaaacatgattgccgatgcgattgacaaggtcggccccgacggagtactttct
atcgagtcgtcgtcttcgtttgaaacgtccgttgatgtggaagaggggatggagtacgat
agaggatacatctctccacagtttgtgaccaatccagaaaagtcgacagtagagttcgac
aatgccaaagttctagtcacggaccaaaagctcacaaccatcaaggatatattgtcggtg
ctggagaagacttctcaaaagagtgctccgctgctcctcatcgccgaggatgtgtccgga
gaagctctggccacgttggtcgtgaacaagctccggggtgttctcaacgttgcagcaacc
aaggctcctggctttggagagcggaggaaagcactccttcaggacattgccatcatcaca
ggcgctgaatatattgcttctgatcttgggctaaaacccgagaccgccactttcgagcag
ctgggaacagcacgcaaagttaaaatcaccaacaactcaacaacgatcattgccgacgtc
gcgagcaaggacgagatccaagctcggatcgctcagctcaagaaagaacttgcagaaacc
gactcagtctatgacacggagaagctatcggagagaatagccaagctttccggtggagtg
gcagtcatcaaggtgggtgctgctaccgaagtagagctcgaggacaggaaactacgcatc
gaagatgcgaagaatgccacctttgccgccatagaggaaggcatcgttccaggcggagga
gcagccatggtacacctctcggcctctgtgtcgaagatcaagcaaagcttgcaagacccc
gaggaaaagattggagctgacatcgtagagaaggctctcttgtccccggcagctttgatc
gcgcacaacgctggcgtggagggagccgtggttgtggagaagatcctggcgagcgagtgg
gagattggctacaacgcaatgaccgatgtttatgagaacttgctcgaggctggagtgatc
gatcctgccaaggtaactcgttgcgctctccagaacgcagcgtcggtggcgggcatggtt
ttgacgacccaagcagtggtagtggagaaaccaaagccaaagacgccagcgccagcagct
ccacagggaatgaccatttaa
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