Selaginella moellendorffii: SemoP_p046
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Entry
SemoP_p046 CDS
T01496
Symbol
rpoA
Name
(RefSeq) RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SemoP_p046 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SemoP_p046 (rpoA)
03400 DNA repair and recombination proteins [BR:
smo03400
]
SemoP_p046 (rpoA)
Enzymes [BR:
smo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SemoP_p046 (rpoA)
Transcription machinery [BR:
smo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SemoP_p046 (rpoA)
DNA repair and recombination proteins [BR:
smo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SemoP_p046 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
8302309
NCBI-ProteinID:
YP_003097511
UniProt:
C7B2H8
LinkDB
All DBs
Position
PT
AA seq
247 aa
AA seq
DB search
MGDTQLPAGPAYRRCIEPKVDNERSYYGRFIISPPKIGQANTLGIAMRRALLGELEGACI
TPAGSPPERINHEYTAIAGVRESVHDILMNLKEIVLKTNPFSAAQEAHIPIVGPRKVTAQ
DIVLPPSVGTMDPTQHIATITRKIHSSIGLRVERGCGFRKRNMIEYQKGSLPPDAVFMPI
RHANYSIHRLGSHGGGIMKEMLLLEARTDGSPTPREAIYEASRNLANLFSPFPHNNIHEH
IDGRKYA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacacacagctacccgcgggacccgcgtaccggaggtgcatcgaacccaaagtc
gacaatgaacgttcctattacggtcgttttattatatccccacccaaaataggtcaagct
aataccctggggatcgccatgcgcagagcattgcttggagaattggaaggagcgtgcatc
actccagcgggatcccccccagaaagaataaaccacgaatataccgcgattgcgggtgtc
cgggaatcagtacatgatattttgatgaatttgaaagaaatcgtgctgaaaactaatcct
ttctccgcggcacaagaggcacatatccctattgtcggacccaggaaggtaactgcccaa
gacattgtactaccaccctccgtaggaacaatggatcccacacagcatatagctaccatc
acaagaaagattcattcgagtattggattgagggttgagagaggttgcgggtttcgtaaa
cgaaatatgatagaataccaaaagggaagccttccgccggatgccgtgttcatgcctata
cgacacgcgaattatagcattcaccgtctcgggagccacggtggggggattatgaaagaa
atgcttttgctcgaggcacggaccgatgggagtcccacacctagagaggccatttacgaa
gcctcgcgaaatttagcgaaccttttcagtccttttccacacaataatatccatgaacac
attgacggaagaaagtatgcatga
DBGET
integrated database retrieval system
