Streptomyces mobaraensis: J7W19_12460
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Entry
J7W19_12460 CDS
T07674
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
smob
Streptomyces mobaraensis
Brite
KEGG Orthology (KO) [BR:
smob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smob03021
]
J7W19_12460
Transcription machinery [BR:
smob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J7W19_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
Sigma70_ECF
MarR_2
HTH_24
DUF7343
DUF8073_C
HTH_3
PF0610-like_N
HTH_Tnp_ISL3
NirdL-like_HTH
MarR
GerE
Motif
Other DBs
NCBI-ProteinID:
QTT77765
LinkDB
All DBs
Position
2972135..2973052
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AA seq
305 aa
AA seq
DB search
MSPRLDEPRSPLSPEAILPRSEDEDTVPYGTAETASSTFPPLPDIPPYDEVEPVDARALS
KTLFARLESLEEGTHEYAYVRNTLVELNLALVRFAASRFRTRSEPMEDIVQVGTIGLIKA
IDRFELSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLTLAKAGDELAQRLD
RSPTVAELARHLGISEDEVVEGMGASNAYTASSLDAPSEDDDHEGTLSARIGYEDHDLEG
VEYVESLKPLIAELPPRDRKILSLRFVGNMTQSEIGEELGISQMHVSRLLSRTLVRLRRG
LLADE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaaccgcgttcccccctctccccggaggcaatccttccgcgc
tctgaggacgaggacaccgtcccctacgggacggcggagaccgcctcgtcgacattcccg
ccccttccggacatccccccgtacgacgaggtggaaccggtggacgcgcgggccctgtcc
aaaaccctcttcgcccgcctcgaatcgctcgaggaaggcacgcacgagtacgcctacgtg
cgcaacaccctggtcgaactcaacctggccctcgtcaggttcgccgcctcccggttccgc
acccgcagcgaaccgatggaggacatcgtccaggtcggcaccatcggcctcatcaaggcc
atcgaccgcttcgagctcagccgcggcgtcgagttcccgaccttcgcgatgccgaccatc
atcggcgagatcaagcgcttcttccgcgacaccagctggtccgtgcgcgtcccgcgccgg
ctccaggagctccggctcaccctcgccaaggccggcgacgaactcgcccagcgcctcgac
cgctcccccacggtcgccgaactcgcccggcacctgggcatctcggaggacgaggtcgtc
gagggcatgggcgccagcaacgcgtacaccgcgagctcgctggacgcgccctccgaggac
gacgaccacgagggcaccctctcggcccggatcggctacgaggaccacgacctcgaaggg
gtcgagtacgtcgagtcgttgaagcccctgatcgccgagctgccgccgcgcgaccgcaag
atcctgtcgctgcggttcgtcggcaacatgacccagtcggagatcggcgaggaactcggc
atctcgcagatgcacgtctcccggctgctctcccggacgctcgtgcggctgcggcgcggg
ctgctggccgacgagtag
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