Streptomyces mobaraensis: J7W19_14650
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Entry
J7W19_14650 CDS
T07674
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
smob
Streptomyces mobaraensis
Brite
KEGG Orthology (KO) [BR:
smob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smob03016
]
J7W19_14650
Enzymes [BR:
smob01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
J7W19_14650
Transfer RNA biogenesis [BR:
smob03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
J7W19_14650
Prokaryotic type
tRNA splicing ligases
J7W19_14650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QTT74484
LinkDB
All DBs
Position
complement(3468775..3469968)
Genome browser
AA seq
397 aa
AA seq
DB search
MPYTELPGARVPIRMWADPASVEDGAMQQLRNVATLPWIEGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSHLRSRIERAIPVGFAMHDEAVDPS
RLHGFPTAPWDDFWRRFDGIAEAVKFRRDRALKQMGSLGGGNHFWEFCLDSDNSVWVMLH
SGSRNIGKELAEYHIEQARKLPHNQGLVDRDLAVFVADTPQMAAYRNDLFWAQEYARLNR
EIMMALSLDVIRREFRKAKVTFEPVISCHHNYVAEETYEGMDLLVTRKGAIRAGGGEYGI
IPGSMGTGSYIVRGLGNAASFNSASHGAGRRMSRNQAKKRFTERDLAEQTQGVECRKDRG
VVDEIPAAYKPIEQVMDQQRDLVEVVAKLKQIVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacaccgagctgcccggcgcccgggtgccgatccgcatgtgggcggatccggcg
tcggtcgaggacggcgccatgcagcagctgcggaacgtggccaccctcccgtggatcgag
ggcctggccgtgatgccggacgtgcactacggcaagggcgcgaccgtcggctcggtgatc
gccatgcgcggcgcggtctgcccggccgccgtgggcgtggacatcggctgcgggatgtcc
gccgtgaagacctccctcacggcgaacgacctccccggcgacctctcccacctccgctcc
cgcatcgagcgcgcgatcccggtgggcttcgcgatgcacgacgaggcggtggacccgagc
cgcctgcacggcttcccgacggcgccgtgggacgacttctggcggcggttcgacgggatc
gcggaggcggtcaaattccgtcgggatcgggcgttgaagcagatgggatcgctcggcggc
ggaaatcacttttgggaattttgtctcgattcggacaattcggtgtgggtgatgttgcac
tccggatcgcggaacatcggcaaggagctggccgagtaccacatcgagcaggctcggaag
ctgccgcacaaccaggggctggtcgaccgtgacctggccgtcttcgtggcggacaccccc
cagatggcggcctaccggaacgacctgttctgggcgcaggagtacgcgcgcctgaaccgc
gagatcatgatggcgctgtcgctggacgtgatccgccgggagttccggaaggcgaaggtg
accttcgagcccgtgatctcctgccaccacaactacgtggcggaggagacctacgagggc
atggacctgctcgtcacccgcaagggcgcgattcgcgcgggcggcggcgagtacggcatc
atccccggctcgatgggcacgggctcgtacatcgtgcgtggtctgggcaacgccgcgtcc
ttcaactcggcctcgcacggcgccggccgccggatgagccgcaaccaggcgaagaagcgg
ttcaccgagcgggacctggcggagcagacccagggtgtggagtgccgcaaggaccgcggt
gtggtggacgagatcccggcggcctacaagccgatcgagcaggtcatggaccagcagcgg
gacctcgtcgaggtggtcgccaagctgaagcagatcgtctgcgtcaagggctga
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