Streptomyces mobaraensis: J7W19_24005
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Entry
J7W19_24005 CDS
T07674
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smob
Streptomyces mobaraensis
Pathway
smob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J7W19_24005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smob03019
]
J7W19_24005
03016 Transfer RNA biogenesis [BR:
smob03016
]
J7W19_24005
Enzymes [BR:
smob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J7W19_24005
Messenger RNA biogenesis [BR:
smob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J7W19_24005
Transfer RNA biogenesis [BR:
smob03016
]
Prokaryotic type
tRNA degradation factors
J7W19_24005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
PCB_OB
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QTT78043
LinkDB
All DBs
Position
5537130..5539352
Genome browser
AA seq
740 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKQPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLPDGDVAIMMVEAEATEKTIQMVKDGAEAPTEEVVAAGLEAAKPFIKVLC
RAQADLAAKAAKPEGEFPIFLDYQDDVLEALTAAVRPELAQALTIAGKQEREAELDRVKA
LAAEKLLPEFEGREKEISAAYRSLTKSLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALMPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGETHYVTLTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPSAEAARATINAIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDQRGKLSL
VPVIEGENDDTAETKDESAK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcgccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcgtccaagcagcccaaggaccag
ctcgacttcttcccgctcacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgcgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctctacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctcgcgggcctgcccttctccggccccatcggcggcacccgc
gtcgccctgatcaagggccagtgggtggcgttcccgacccacaccgagctcgaggacgcc
gtcttcgacatggtcgtggccggccgcgtcctcccggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagatggtcaaggacggcgccgaggccccc
accgaggaggtcgtcgccgccggtctcgaggccgcgaagcccttcatcaaggtcctctgc
cgcgcccaggccgacctcgccgccaaggccgccaagcccgagggcgagttcccgatcttc
ctggactaccaggacgacgtcctggaggcgctgaccgccgccgtccgccccgagctggcc
caggcgctcaccatcgccggcaagcaggagcgcgaggccgagctggaccgcgtcaaggcg
ctcgccgccgagaagctcctcccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagtccctggtccgggagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggtgtcaccgacatccgcaccctggccgccgaggtcgaggccatcccgcgg
gtccacggctccgccctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgccctcgccgagcgcgcgctcatgcccgtcctgccg
tcgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgggctccaacggc
tcgacctccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctgaaggccccggtcgccggcatcgccatgggcctgatctcccaggagatcgacggcgag
acccactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgccctccagctcgacaccaagctggac
ggcatcccggcctccgttctggccgcggccctcaagcaggcccgcgacgcacgcctgcac
atcctcgacgtgatgatggaggccatcgacacgccggacgagatgtcccccaacgccccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcaccatcgaggacgacggc
accatctacatcggtgccgccgacggcccctctgccgaggccgcccgcgccacgatcaac
gcgatcgccaacccgaccatgccggaggtcggcgagcggtacctgggcacggtcgtcaag
accaccaccttcggtgccttcgtctccctcatgcccggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgtgtggagaacgtcgaggacgtgctcggc
gtcggcgccaaggtccaggtcgagatcgccgagatcgaccagcgcggcaagctctccctc
gtccccgtgatcgagggcgagaacgacgacaccgccgagaccaaggacgagtccgccaag
tga
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