Streptomyces mobaraensis: J7W19_24985
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Entry
J7W19_24985 CDS
T07674
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smob
Streptomyces mobaraensis
Brite
KEGG Orthology (KO) [BR:
smob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smob03016
]
J7W19_24985
Enzymes [BR:
smob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J7W19_24985
Transfer RNA biogenesis [BR:
smob03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J7W19_24985
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QTT76200
LinkDB
All DBs
Position
complement(5780182..5781459)
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AA seq
425 aa
AA seq
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MTDAQDTAADPPLRTTGGGPPDDVEPAPIPLLEPREGIPPVVADRDALAAVVAAFAGGRG
PVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVGCPDLSSLGEAIGDAEWVLHAATQ
DLPCLREIGMTPARLFDTELAGRLAGFARVGLGAMVENVLGYALEKGHSAVDWSTRPLPE
PWLRYAALDVELLIDLRNALEKELDRQGKLEWARQEFDAIAAAPPAPPRKDPWRRTSGMH
KVRRRRQMAVVRELWTARDQIAQKRDVSPGKVLGDGAIIEAALNMPANAHALAALPGFGP
RMSRRQLEQWQAAVDRARAVPESELPQPGQPLTGPPPPRAWADKDPVAAARLSAARAAVS
ALAERLTMPQENVITPDTVRRVCWEPPRDLSPEAVAAALAGHGARPWQVEQVTPVLVRAL
REASA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagacaccgcagcagacccaccactgcgaaccaccgggggcggcccc
ccggacgacgtcgaaccggcgccgatccctttgctggaaccacgtgagggcatcccgccg
gtcgtcgccgaccgcgacgccctggccgccgtcgtcgccgccttcgccgggggccgcggg
cccgtggccgtcgacgccgagcgcgcctccggctaccggtacgggcagcgcgcctacctc
gtccagctccgccgcgaaggcgccggctcggccctgatcgaccccgtcggctgccccgac
ctctcgtcgctcggcgaggccatcggcgacgccgagtgggtcctgcacgccgccacccag
gacctcccctgcctccgcgagatagggatgacaccggcccggctgttcgacaccgagctg
gccggacggctcgccgggttcgcgcgggtgggactcggcgccatggtcgagaacgtcctc
ggctacgccctggagaagggccactcggccgtcgactggtccacccgaccgctgcccgag
ccctggctgcgctacgccgcgctcgacgtggagctgctgatcgacctgcgcaacgcgctg
gagaaggaactcgaccggcagggcaagctggagtgggcccgccaggagttcgacgccatc
gccgccgcgccgcccgcgccgccgcgcaaggacccctggcggcgcacctccggtatgcac
aaggtgcgccggcgccggcagatggccgtcgtccgcgaactgtggaccgcgcgcgaccag
atcgcgcagaagcgcgacgtctcgccgggcaaggtgctcggcgacggcgcgatcatcgag
gccgcgctcaacatgccggccaacgcgcacgcgctggccgcgctgcccggcttcgggccg
cggatgagccgccgtcagctggagcagtggcaggcggcggtggaccgggcgcgggccgtc
ccggagtccgaactcccgcagcccggccagccgctgaccgggcctccgccgccgcgcgcc
tgggcggacaaggatcccgtcgcggcggctcgcttgtcggcggcgcgggccgctgtgtcg
gcgttggctgagcggttgacgatgcctcaggaaaatgtgatcacgccggatacggtgcgg
cgggtttgctgggagccgccgcgggatctttcgccggaggccgtcgcggctgccctcgcc
gggcatggggctcggccctggcaggtggagcaggtgacgccggtgcttgtccgcgcgctg
cgggaggcttcggcctga
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