Streptomyces moderatus: POD33_00720
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Entry
POD33_00720 CDS
T10886
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smod Streptomyces moderatus
Pathway
smod00040
Pentose and glucuronate interconversions
smod01100
Metabolic pathways
smod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
POD33_00720
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
POD33_00720
Enzymes [BR:
smod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
POD33_00720
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WCH90733
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Position
complement(154199..155512)
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AA seq
437 aa
AA seq
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MNTQIWHGHATRKAAVLVGCTALVLGLTGTGSAQAGGRDLGREVLPAGDGWASEGAGTTG
GSAADAAHVHTVTTWAEFRQALADGGSAPKIIKVKGMIDAVSEGCDAFATEGYDFQRYLA
DYDPAVWGHDTPVSGAQEDLRAASAAAQDQAIKANVPANTTIVGVGKGSGILGGSLQIKG
VDNVILRNLTVEAPIDCFPQWDPTDDNRTGAWNSEYDSVVVYGSTHVWIDHNTLTDGRYL
DSSLPSYFGKVYQQHDGLLDVVRGADHVTVSWNSFEDHDKTMLIGNSDSAGSTDTGKLKV
TLHHNRFEGIVERAPRVRFGQVDSYNNHFVVTKGQNYGYVFGIGASSQLYATHNALSLAS
GVSVGKALKKWNEAPLTAENNYVNGRPTDLIAVHNAEIPGEILQSGAGWTPTLRTKVDSP
RAVPGIVDHRAGAGRLR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacagatatggcatgggcatgccacaagaaaggctgccgtcctggtcgggtgc
accgcgctggtgctcggactcaccggcaccgggtcggcgcaggccggcggccgggacctc
gggcgcgaggttctccccgcgggggacggctgggcctcggagggcgccggcaccaccggc
gggtcggccgccgacgccgcgcacgtccacaccgtcaccacctgggcggagttccggcag
gccctcgccgacggcggcagcgcaccgaagatcatcaaggtcaagggcatgatcgacgcc
gtttccgaggggtgcgacgccttcgcgacagaggggtacgacttccagcgctacctcgcc
gactacgaccccgccgtgtgggggcacgacacccccgtcagcggcgcccaggaggacctg
cgggccgcgtccgccgccgcccaggaccaggccatcaaggcgaacgtccccgccaacacc
accatcgtcggcgtcggcaagggctccggcatcctcggcggcagcctccagatcaagggc
gtcgacaacgtcatcctgcgcaacctcaccgtcgaggcccccatcgactgcttcccgcag
tgggacccgaccgacgacaacaggaccggcgcctggaactccgagtacgactcggtggtc
gtgtacggatccacccatgtgtggatcgaccacaacacactcaccgacggccgctacctc
gacagctccctgccctcgtacttcggcaaggtctaccagcagcacgacggactgctcgac
gtcgtgcgcggtgccgaccacgtgaccgtgtcctggaattccttcgaggaccacgacaag
accatgctgatcggcaacagcgacagcgccggctccaccgacaccggcaagctcaaggtc
accctgcaccacaaccgcttcgagggcatcgtcgagcgggcgccgcgcgtgcggttcggg
caggtcgactcgtacaacaaccacttcgtcgtcaccaagggccagaactacgggtacgtg
ttcggcatcggcgcctcctcgcagctgtacgccacgcacaacgccctgtcgctggcctcc
ggcgtgagcgtcggcaaggcgctgaagaagtggaacgaggcaccgctgaccgccgagaac
aactacgtcaacggcaggccgacggacctcatcgccgtccacaacgccgagatccccggt
gagatcctccagtccggcgccggatggacaccgaccctgcggacgaaggtcgacagccca
agggccgtgcccgggatcgtcgaccaccgcgcgggcgccggccgcctgcgctga
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