Streptomyces moderatus: POD33_02000
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Entry
POD33_02000 CDS
T10886
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smod Streptomyces moderatus
Pathway
smod03030
DNA replication
smod03430
Mismatch repair
smod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
POD33_02000 (dnaE)
03430 Mismatch repair
POD33_02000 (dnaE)
03440 Homologous recombination
POD33_02000 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smod03032
]
POD33_02000 (dnaE)
03400 DNA repair and recombination proteins [BR:
smod03400
]
POD33_02000 (dnaE)
Enzymes [BR:
smod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
POD33_02000 (dnaE)
DNA replication proteins [BR:
smod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
POD33_02000 (dnaE)
DNA repair and recombination proteins [BR:
smod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
POD33_02000 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
WCH90970
LinkDB
All DBs
Position
complement(425863..429402)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWAVNKTGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGELQTRLRLGQYDEALKAAADYQD
IFGKDRYFLELMDHGIEIEHRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAVDSSDAWQEGCANTLLVAEMVDTTGMFEKRD
LMPKFDIPEGYTEVTWFKEEVRRGMERRFPGGIPEDRQKQVDYEMDVIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLDGITNPSHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIELDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNKLQEITPIHKELEEPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVLFQKGARDKGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVESIIKSRKAKGKYASFPDYLDKVDATACNKRTT
ESLIKAGAFDSLGHTRKGLTAHFEPMIDNVVAVKRKEAEGQFDLFGGMGEEESNEPGFGL
DVVFTEDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVILTIPATRVTPPMVNRLGEILSHHKGDSEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaatgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccacaccgcgaagaaggcc
ggggtcaccccgatcatcgggatcgaggcctacgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggtcagccgcaccagaagcgcgatgacgtttccggttccggtggt
tacacccacaagacgatgtgggccgtgaacaagacgggcctgcacaacctcttccggctg
tcctcggacgcgtacgccgagggctggctccagaagtggccccggatggacaaggagacc
atctcccagtggtccgaggggatcgtcgcctccaccggctgcccctccggcgagctccag
acccggctgcgcctcggccagtacgacgaggcactgaaggcggcggccgactaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcac
cgggtccgtgacggcctcctggagatcggcaagaagctcggcatcccgccgctggtgacg
aacgactcgcactacacgtacgcgcacgaggcgaccgcccatgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccgtcgactcctcggacgcctggcaggagggctgc
gcgaacacgctgctcgtcgccgagatggtcgacacgaccggcatgttcgagaagcgggac
ctcatgcccaagttcgacatccccgagggctacaccgaggtcacctggttcaaggaggag
gtgcgccgaggcatggagcgccgcttccccggcggcatccccgaggaccgccagaagcag
gtcgactacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtcgtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggtccggggcgaggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgatgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcctcaccaaggcgatgccc
gccgacgtgctcggcaagggcatcgacctcgacggcatcaccaacccctcgcacccgcgc
tacagcgaggcgggcgagatccgcgggatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgcgaagggcgtcgagggcctggtccggcagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtgcggcacaccgac
ggcgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggcatcgaactcgacctgctctccctgccgctcgacgacccgacgaccttcgaa
ctcctccagcgcggcgacaccctgggcgtcttccagttcgacggcggcccgatgcgctcg
ctgctgcggctgatgaagcccgacaacttcgaagacatctccgccgtctccgcgctgtac
cgtccgggcccgatgggcatggactcgcacaccaactacgccctgcgcaagaacaagctc
caggagatcaccccgatccacaaggagctggaggagcccctcgaagaggtcctggccgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactccctcggcgaggccgacatcctgcgccgagtgatgggcaagaagaagcccgacgaa
ctggcgaagaacttcgtcctcttccagaagggcgcccgcgacaagggctacagcgacgag
gccatccaggccctgtgggacgtgctggtccccttcgccggctacgcgttcaacaaggcg
cactccgccgcgtacggcctggtgtcgtactggaccgcctacctcaaggcgaaccacccc
gccgagtacatggccgcgctgctgacctccgtcaaggacgacaaggacaagtcggccgtc
tacctgaacgagtgccggcgcatgggcatcaaggtgctcccgccgaacgtcaacgagtcg
gtgcacaacttcgccgcccagggcgacgacgtgatcctgttcggcctggaggccgtgcgc
aacgtcggcaccaacgtcgtcgagtcgatcatcaagagccgcaaggcgaagggcaagtac
gcctccttccccgactacctcgacaaggtcgacgcgaccgcgtgcaacaagcgcaccacc
gaatcgctgatcaaggcgggcgcgttcgacagcctggggcacacccgcaagggcctcacc
gcgcacttcgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgaggaggagagcaacgagcccggcttcggactc
gacgtggtcttcaccgaggacgagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctcttcggcctggagcacgtgctgtccgac
aaggccgacgcgggcatcgcccaactcaccggcggtgagcacgcggacggcgcggtcgtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtcgaggacctcgccggttccatcgagtgcatgttcttcccggcgacc
taccagctcgtgtcgacccaactcgtcgaggacgccgtggtgttcgtcaagggccgcctc
gacaagcgcgaggacgtgccgcggttggtcgcgatggagctccaggtccccgacctgtcc
aacgcgggcaccaacgcgcccgtgatcctcaccatcccggcgacccgcgtcaccccgccg
atggtgaaccggctcggcgagatcctcagccaccacaagggcgacagcgaggtccggatc
aagctccagggcccgaccaagaccacggttctacggctggaccggcaccgggtgaagccc
gacccggcgctgttcggtgacctgaaggtgctgctcggaccgtcctgcctggccggctga
DBGET
integrated database retrieval system
