Streptomyces moderatus: POD33_19195
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Entry
POD33_19195 CDS
T10886
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smod Streptomyces moderatus
Pathway
smod03420
Nucleotide excision repair
smod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
POD33_19195
03430 Mismatch repair
POD33_19195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smod03400
]
POD33_19195
Enzymes [BR:
smod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
POD33_19195
DNA repair and recombination proteins [BR:
smod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
POD33_19195
MMR (mismatch excision repair)
Other MMR factors
POD33_19195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WCH94135
LinkDB
All DBs
Position
4210257..4213745
Genome browser
AA seq
1162 aa
AA seq
DB search
MSARITDPDQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVKAGVTDPDVIDPDNPPGEPVISTYHAFAGRLL
TDHGLRIGLEPTSRLLADATRYQLAARVLREAPGPYPALTRSFADLVSDLLNLDAELAEH
LVRPEKLRAHDAELLLTLQSAKLTNADLRKVPEAAAARRELADLVVRYRAAKRERDLLDF
GDQIALSAQLSAIPEVGRVLRDEFRVVLLDEYQDTSVAQRVLLAGLFGDGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFAHADGHPATRQALSENRRSGGRLLDLANGLAEPLRAM
HAGVEALRPAPGAERDGIVRCALLPTHAEEIDWIADSVAHLVNTGKAPGEIAVLCRTATD
FAEIQGALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQDPGANASLVRLLSGPRWRIG
PRDLALLGRRARTLVSHARVDGDDDPDRRLAEAVEGVDPAEVISLADALDTFLETPLDGD
GDDDGLPFSPDARVRFARLATELRDLRRSLSDPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDIAASFAAGDNEASLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHK
SKGLEWDVVAVPGLVNGTFPSTQGREKWTAQAKVLPHELRGDTDTLPDVTSWDSRGLKAF
QEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPTQKKPRGPSDFLQALYDHCVAGHG
EIEAWADEPAEDEENPALHRESADQLWPLPLDTAALTRRRAAAETVLAHLENLASHEDDH
PAATHDPDVYDDPDWPPPPDDDEAFADDPQFADDPQDEDPEDWDSWTTDRPTPAIPHQAQ
PPEPAGRPHPAQPAPLTPEEARTLASWDRDLDALTGELLRARTSVTDVPLPASLTASQLL
RLAADPDGFAQELARPMPRPPQPAARRGTRFHAWVEARFEELTLPMLEPDDLPGTEAEIA
DERDLEALKDAFERTEYAHRTPHRVEAPFQLAIADRVVRGRIDAVYRTGDGEGATYEIVD
WKTNRTLTADPLQLALYRLAWAEQQGVPLESVDAAFLYVRTGEVVRPDDLPGREALERLL
GEEPVAEVNCEEPPNQDVGAGR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcccgtatcaccgatcccgatcagctcaaggagctcctcggcatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcggggaagacgacggtgatggcggcccgcgtggtgtggctggtcggcacgggccag
gtcgcccccgagcaggtcctcggcctgaccttcaccaacaaggccgccggtgaactcgcc
gagcgggtccgcaaggcactcgtcaaggcaggcgtcaccgacccggacgtcatcgatccc
gacaacccgcccggcgagccggtgatctccacctaccacgccttcgccggccgcctgctg
accgaccacggcctgcgcatcggcctcgaaccgacctcccggctgctcgccgacgccacc
cgctaccagctcgccgcgcgcgtgctgcgcgaagccccgggcccctacccggccctcacc
cgctccttcgccgacctcgtcagcgacctcctcaacctcgacgccgaactcgccgagcac
ctcgtacgccccgagaagctgcgcgcacacgacgccgaactgctgctcaccctccaatcc
gccaagctcaccaacgccgacctgcgcaaggtccccgaagcagccgctgcccgccgagaa
ctcgccgatctcgtggtccgctaccgcgccgccaaacgcgaacgcgacctgctcgacttc
ggcgaccagatcgccctgtcggcgcagctctccgccatccccgaagtgggccgcgtcctg
cgcgacgagttccgcgtggtcctcctggacgagtaccaggacacctccgtcgcccaacgc
gtcctcctggcgggcctgttcggcgacggcaccggacaccccgtgacggccgtaggcgac
ccctgccaggcgatctacggctggcgcggtgcctccgtcgccaacctcgacgacttcccc
gagcacttcgcccacgccgacggccaccccgccacccgccaggccctcagcgagaaccgc
cgcagcggcggccgcctcctcgacctcgccaacggcctcgccgagcccctgcgcgccatg
cacgcgggcgtggaggccctgcgcccggcacccggcgccgaacgcgacggcatcgtccgc
tgcgccctcctgcccacccacgccgaggagatcgactggatcgccgactccgtcgcccac
ctcgtgaacaccggcaaggcacccggcgagatcgccgtcctgtgccgtacggcgaccgac
ttcgccgagatccagggcgcgctcgtcgcccgcgacgtccccgtcgaggtggtcggcctg
tccgggctgctccacctgcccgagatcgccgacctggtcgccgtctgcgaggtcctccag
gacccgggcgccaacgcctccctggtccgcctgctcagcggcccccgctggcgcatcggc
ccccgggacctcgctctgctggggcgccgggcccgcacgctggtgtcgcacgcgcgcgtg
gacggcgacgacgaccccgaccgcaggctggccgaggccgtcgagggggtcgaccccgcc
gaggtcatctcgctcgcggacgccctcgacacgttcctggagacgccgctggacggcgac
ggggacgacgacgggctgcccttctcaccggacgcgcgcgtgcggttcgcccgcctcgcc
accgaactgcgcgacctgcgccgctcactgtccgacccgctgatggacgtcctgcaccgc
gtcctcgccgtcaccggcctggaggtcgagctgtcggcctccccgcacgcgctggccgcc
cgccgccgcgagaccctgtccaacttcctggacatcgccgcctccttcgcggccggtgac
aacgaggcgagcctgctcgccttcctcggcttcctacgcaccgcagcccagtacgagaag
ggcctcgacaacgccctccccggcggcgagaacaccgtcaaggtgctcaccgcgcacaag
tccaagggcctggaatgggacgtcgtcgccgtccccggcctggtcaacggcaccttcccc
agcacccagggccgcgagaagtggaccgcacaggcaaaggtgctcccgcacgaactgcgc
ggcgacaccgacaccctccccgacgtcacctcctgggactcccgcggcctgaaagccttc
caggaggccatgaaggaccaccagcacaccgaggaactccgcctcggctacgtcaccttc
acccgcccccgctccctgctcctcggctccggccactggtggggccccacccagaagaag
ccccgcggcccctccgacttcctgcaagccctgtacgaccactgcgtcgccggccacggc
gagatcgaagcgtgggcggacgaaccggccgaggacgaggagaacccggccctgcaccgg
gagagcgccgaccagctgtggcccctgcccctcgacacggccgccctgacccgccgccgc
gcggccgccgagacggtcctggcacacctggagaacctggcatcccacgaggacgaccac
cccgccgcgacccacgacccggacgtctacgacgatccggactggcccccgccaccggac
gacgacgaggcgttcgccgacgatccgcagttcgccgacgatccgcaggacgaggacccc
gaggactgggactcctggaccaccgaccgccccaccccggccatcccgcaccaggcgcaa
cccccggagcccgccggccgcccccaccccgcacagccggcccccctcacccctgaggag
gcccgcactctcgcctcctgggaccgcgacctcgacgccctcaccggcgagctcctgcgc
gcccgcacgagcgtcacggacgtacccctgcccgcgtcactgaccgcgtcccagctgctg
cgcctggccgccgacccggacgggttcgcgcaggaactcgcgcgccccatgccacgcccc
ccacaacccgccgcacgtcgaggcacccgattccacgcctgggtcgaagcccgcttcgag
gaactgacgctgcccatgctggagccggacgacctccccggcaccgaggccgagatcgcc
gacgagcgcgacctggaagccctcaaggacgccttcgaacgcaccgagtacgcccaccgc
acgccccaccgcgtcgaggcccccttccagctcgcgatcgccgaccgcgtcgtacggggc
cgcatcgacgccgtctaccggaccggcgacggcgagggggcgacgtacgagatcgtcgac
tggaagaccaaccgcaccctcaccgccgacccgctccagctcgccctgtaccggctcgcc
tgggccgagcagcagggcgtacccctggagtccgtcgacgccgcgttcctgtacgtccgc
accggcgaggtcgtacgcccggacgacctcccgggccgtgaggcactggagcgactgctc
ggcgaagagcccgtcgccgaggtgaactgtgaggaaccgcccaaccaggatgtcggtgcg
ggccgatag
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