Streptomyces moderatus: POD33_20045
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Entry
POD33_20045 CDS
T10886
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
smod Streptomyces moderatus
Pathway
smod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
POD33_20045 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smod03021
]
POD33_20045 (rho)
03019 Messenger RNA biogenesis [BR:
smod03019
]
POD33_20045 (rho)
Transcription machinery [BR:
smod03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
POD33_20045 (rho)
Messenger RNA biogenesis [BR:
smod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
POD33_20045 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WCH94295
LinkDB
All DBs
Position
4402900..4404897
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AA seq
665 aa
AA seq
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MSDTTDLMGARVEETAAAPATDASAPAGGAGSRRRRGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGGAAAPKAEAATETKPKRRATSKARTGEDAEKKAEKAAEAPA
EKAVAQQQIEIPGQPAGGPSRDGNEDAPAERRRRRATADAGSPSAAPETVAAEARNESKA
ETPAHSQGDAKSDADGGEGRRRDRRERGRDRDRGDRRKGDDQQGGGRQDRQQGQQQGGGR
QDRQRDNGPQDDDDFEGGRRGRRGRYRDRRGRRGRDDVQEPQIAEDDVLIPVAGILDILD
NYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHITGAVRQPKEGERREKFNALVRLDSV
NGMAPEHGRGRPEFNKLTPLYPQDRLRLETDPGVLTTRIIDLVSPIGKGQRGLIVAPPKT
GKTMIMQAIANAITHNNPECHLMVVLVDERPEEVTDMQRSVKGEVISSTFDRPAEDHTTV
AELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALYPPKRFFG
AARNIEDGGSLTILATALVDTGSRMDEVIFEEFKGTGNMELKLDRKLADKRIFPAVDVDA
SGTRKEEILLGNEELAVVWKLRRVLHALDQQQAIELLLDKMKQTKSNVEFLMQIQKTTPT
PGNGD
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcacgtgtcgaggagaccgctgccgcgcccgcc
acggacgcctccgcgcctgccggcggtgccggctcccggcggcgccgcggtaccggcctc
gagggcatggtgctggccgagcttcagcaggtcgcatccggcctcggcatcaggggcacg
gcgcgcatgcgtaagagccagctgatcgaggtcatcaaggaggcgcaggccgggggaggt
gccgcggctccgaaggcggaggccgccaccgagaccaagcccaagcgccgtgccacctcc
aaggcccgtaccggcgaggacgccgagaagaaggcggagaaggcggctgaggcccccgcc
gagaaggccgtggcccagcagcagatcgagattcccggccagccggccggcggcccctcc
cgcgacgggaacgaggacgccccggccgagcgccgtcgtcgccgcgccaccgcggacgcg
ggcagcccgtccgccgcgccggagaccgtcgccgccgaggccaggaacgagtcgaaggcc
gagacgcccgcccactcgcagggcgacgccaagagtgacgccgacggcggcgagggccgt
cgtcgtgaccgccgtgagcgcggccgcgaccgtgaccgcggtgaccgtcgcaagggcgac
gaccagcagggcggcggccgtcaggaccgtcagcagggccagcagcagggcggtggccgt
caggaccgccagcgcgacaacggcccgcaggacgacgacgacttcgagggcggccgtcgt
ggccgtcgcggccgctaccgggaccgtcgtggccggcgtggccgtgacgacgtgcaggag
ccgcagatcgccgaggacgacgtcctgatcccggtcgcgggcatcctggacatcctcgac
aactacgccttcatccgtacgtcgggctacctgccgggccccaacgacgtgtacgtctcc
ctcgcccaggtccgcaagaacggcctgcgcaagggtgaccacatcaccggcgcggtccgt
cagcccaaggaaggcgagcggcgcgagaagttcaacgcgctggtccgcctcgactccgtc
aacggcatggcgcccgaacacggccgcggccgcccggagttcaacaagctcaccccgctc
tacccgcaggaccgcctccgcctggagacggacccgggcgtcctcaccacgcgcatcatc
gacctggtgtcgccgatcggtaagggccagcgcggtctgatcgtggccccgccgaagacc
ggcaagaccatgatcatgcaggcgatcgccaacgcgatcacgcacaacaaccccgagtgc
cacctgatggtcgtcctcgtcgacgagcgtccggaggaagtcaccgacatgcagcggtcg
gtgaagggcgaggtcatctcctcgaccttcgaccgtccggccgaggaccacaccacggtc
gccgagctcgccatcgagcgtgcgaagcgcctggtggagctgggtcacgacgtcgtcgtg
ctgctcgactcgatcacccgactgggccgtgcgtacaacctcgccgccccggcctccggc
cgcatcctgtccggtggtgtcgactcgaccgccctgtacccgccgaagcgcttcttcggt
gcggcccgcaacatcgaggacggcggctcgctgaccatcctcgccaccgctctggtggac
accgggtcccgcatggacgaggtgatcttcgaggagttcaagggcaccggcaacatggag
ctcaagctcgaccggaagctcgccgacaagcgcatcttcccggcggtggacgtcgacgcg
tccggtacccgtaaggaagagatcctgctcggcaacgaggagctcgcggtcgtctggaag
ctgcgccgggtgctgcacgcgctcgaccagcagcaggcgatcgagctgctgctcgacaag
atgaagcagacgaagtcgaacgtcgagttcctgatgcagatccagaagacgacgccgacc
cccggcaacggcgactag
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