Streptomyces moderatus: POD33_22160
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Entry
POD33_22160 CDS
T10886
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smod Streptomyces moderatus
Pathway
smod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
POD33_22160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smod03019
]
POD33_22160
03016 Transfer RNA biogenesis [BR:
smod03016
]
POD33_22160
Enzymes [BR:
smod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
POD33_22160
Messenger RNA biogenesis [BR:
smod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
POD33_22160
Transfer RNA biogenesis [BR:
smod03016
]
Prokaryotic type
tRNA degradation factors
POD33_22160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WCH94694
LinkDB
All DBs
Position
4867685..4869913
Genome browser
AA seq
742 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
VFDMVVAGRTLEDGDVAIMMVEAEATEGTIKLVQGGAEAPTEEVVAAGLEAAKPFIKVLC
KAQADLAAKAAKPTGEFPIFLDYQDDVLEALSAAVKPELASALTIAGKQERESELDRVKA
LAAEKLLPEFEGREKEISAAYRSLTKQLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSAVFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQDIEGETHYVTLTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPAAEAARTTINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKLSL
VPVIEGEEGADASEDKKDDSDK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggctccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagaaccccaaggaccag
ctcgacttcttccccctgacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgtgagggccgcccctccgaggacgccatcctcacctgccgc
ctcatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgccacgatcatggcgctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcgtccgcgtcgacgcagctggccggtctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgcgggccgcaccctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagggcaccatcaagctcgtccagggtggcgccgaggccccg
accgaggaggtcgtcgccgccggtctggaagccgcgaagcccttcatcaaggtgctctgc
aaggcccaggccgacctcgccgcgaaggccgccaagccgaccggtgagttcccgatcttc
ctggactaccaggacgacgttctcgaagccctgagcgccgccgtcaagccggagctcgcc
tccgcgctgaccatcgccggcaagcaggagcgcgagtccgagctggaccgcgtcaaggcg
ctcgccgccgagaagctcctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctccctgaccaagcagctcgtccgcgagcgcgtgatcaaggagaagaagcgcatc
gacggccgtggcgtgacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctccgccgtgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacacgctgtcgccggtgacgcgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgccctcgccgagcgcgccctggtcccggtcctgccg
acgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgagctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggcccccgtcgccggtatcgccatgggcctgatctcccaggacatcgagggcgag
acccactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgccctccagctcgacaccaagctggac
ggcatcccggcctccgtcctggccgccgccctcaagcaggcccgtgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgcgccg
cggatcatcaccgtgaagatcccggtcgacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcaccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggtgcgttcgtgtcgctgctcccgggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtcctcggc
gtgggccagaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctc
gtccccgtgatcgagggcgaggaaggggccgacgcctccgaggacaagaaggacgactcc
gacaagtga
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