Streptomyces moderatus: POD33_25490
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Entry
POD33_25490 CDS
T10886
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
smod Streptomyces moderatus
Pathway
smod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
POD33_25490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smod03000
]
POD33_25490
03400 DNA repair and recombination proteins [BR:
smod03400
]
POD33_25490
Enzymes [BR:
smod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
POD33_25490
Transcription factors [BR:
smod03000
]
Prokaryotic type
Helix-turn-helix
AraC family
POD33_25490
DNA repair and recombination proteins [BR:
smod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
POD33_25490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WCH95310
LinkDB
All DBs
Position
5640322..5641803
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AA seq
493 aa
AA seq
DB search
MQKGMHIDTGRCVRAVQSKDARFDGWFFTAVVTTGIYCRPSCPAVPPKPENMRFLPSAAA
CQQAGFRACKRCRPDTSPGSPEWNQRADLVARAMRLIADGVVDREGVPGLAARLGYSTRQ
VERQLLAELGAGPLALARAQRAQAARLLIETTSLPMADVAFAAGFASIRTFNDTVREVFA
LSPSDLRARAPRGNPGNTTGALTLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRT
LRLPYGHGIVTLTPKPDHIACRLTLGDLRDLTVAISRCRRMLDLDADPVAIDDQLRTDPL
LAPLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGEPVDDPEGGLT
HLFPAPEALASVDPESLAMPRTRRTTFTTLVRQLADGEVRLGPDSDWPATRARLLDLPGF
GPWTVDVIAMRALGDPDAFLPTDLGIRRAAQELGLPSTPAALTARAAAWRPWRAYAVQYL
WATDSHPINFLPV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggggatgcacatcgacacggggcgctgtgtgcgcgccgttcagtccaaggac
gcccgcttcgacggatggttcttcaccgcggtcgtcacgaccgggatctactgccggccc
agttgcccggcggtcccgcccaagccggagaacatgcggttcctgccgagcgctgccgca
tgccagcaggccggattccgcgcctgcaagcgctgccgcccggacaccagccccggctcc
ccggagtggaaccagcgcgccgacctcgtggcccgcgcgatgcggctcatcgccgacggc
gtcgtggaccgcgagggcgtgcccggcctcgccgcccggctcggctacagcacccggcag
gtcgaacgccagctcctcgccgaactgggcgccggcccgctcgccctggcccgcgcccag
cgcgcccaggcggcccgcctcctcatcgagacgacatcgctgcccatggcggacgtcgcc
ttcgcggccgggttcgcctccatccgcaccttcaacgacaccgtccgcgaggtcttcgcc
ctctcacccagcgacctgcgcgcccgcgcaccccgcggcaaccccggcaacaccaccggc
gccctgaccctgcgcctgccgttccgcgcccccctcaaccccgacaacctcttcgggcac
ctcgccgcgaccgccgtacccggcgtcgaggagtggcgggacggcgcctaccggcgcacg
ctgcggctgccgtacggccacggcatcgtgaccctcaccccgaagcccgaccacatcgcc
tgccggctcaccctcggcgacctgcgcgatctgaccgtggcgatcagccggtgccgccgc
atgctcgacctggacgccgaccccgtcgcgatcgacgaccagctgcgcaccgacccgctg
ctcgcgcccctggtcgacaaggctcccggccgccgggtgccgcgcaccgtcgacgaggcc
gagttcgccgtccgtgccgtgctcggccaacaggtctccaccgcggccgcccgcacccac
gcggcccgcctggtcaccgcccacggcgagccggtcgacgaccccgagggcggcctcacc
cacctcttcccggcacccgaggcactcgcgtcggtggacccggagtcactggcgatgccc
cgcacccgccgcacgacgttcaccaccctggtacgtcaactcgccgacggcgaggtgcgc
ctgggccccgacagcgactggccggcgacccgggcccgactgctggacctccccggcttc
ggcccctggacggtcgacgtcatcgcgatgcgcgccctcggcgaccccgacgccttcctc
cccaccgacctcggcatccgccgcgccgcccaggagctgggcctgccgtcgacccccgcg
gccctcacggcacgcgcggcggcctggcggccctggcgggcgtacgccgtccagtacctg
tgggcgacggacagccacccgatcaacttcctccccgtataa
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