Streptomyces moderatus: POD33_25970
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Entry
POD33_25970 CDS
T10886
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smod Streptomyces moderatus
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
POD33_25970
Enzymes [BR:
smod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
POD33_25970
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
WCH95399
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Position
5738380..5740254
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AA seq
624 aa
AA seq
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MQHPRRHRRRRAALSAAITAAGLIAAGLTTLGGAGTAQAATARQVEALDRGVVSVHTAGG
NLVSWRWLGTDPNDVAFNVYRAGTKVNSAPVTGSTNYFHSGAPEQADYTVRAVVGGVEQA
DSVHAVQFRPGYKDVPISPPAGGTTPDGVAYTYEANDASVGDLDGDGALDFVLKWQPTNA
KDNSQSGYTGNTIVDGIRLDGTRLWRIDLGRNIRSGAHYTQFQVYDYDGDGKAEVAMKTA
DATVDGTGAVIGSPSADHRNSSGYVLSGPEYLTMFNGQTGRAMGTVDYVPARGTVSSWGD
SYGNRVDRFLAGTAYLDGSRPSLIMARGYYTRTVIAAWDWRNGAFTRRWTFDTNSSTNSG
KGFDGQGSHSLSVGDVDGDGRDEIVYGAMAVDDNGGGLWTTKTGHGDAQHLADLDPSHAG
LEYFKVSESTSQPAELYINPANGTVNWKLAACCDNGRGVAGDIYAGNDGAEVWSASDTSV
RDEAGATKGREPSSVNFLSWWDGDTVRELLDGTHIDKYGTSSDTRLLTGSGVSSNNGTKA
TPVLSGDILGDWREEVVWRTSGNTALRIHSTPYETNTRITTLLHDTMYRTGLSWQNTAYN
QPPHPSFFLGNGMGTAPRPAVYTP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcacccgcgcaggcaccgcagacgccgggccgcactgtccgcggccataaccgcc
gccggcctgatcgccgccggactcaccacgctcggcggcgccggcacggcgcaggccgcc
accgcccgccaggtcgaggccctcgaccggggcgtggtcagcgtccacacagccggcggc
aacctggtcagctggcgctggctcggcaccgacccgaacgacgtcgccttcaacgtctac
cgggccggcaccaaggtcaactccgcccccgtcaccggctcaacgaactacttccactcc
ggcgcccccgaacaggccgactacaccgtccgggccgtcgtgggcggcgtcgagcaggcc
gactccgtgcacgccgtgcagttccgcccgggctacaaggacgtccccatcagcccgccg
gccggcggtacgacccccgacggggtcgcttacacctacgaggccaacgacgcctccgtc
ggcgacctcgacggcgacggcgccctcgacttcgtcctgaagtggcagcccaccaacgcc
aaggacaactcccagtccggctacaccggcaacacgatcgtcgacggcatcagactcgac
ggcacccggctgtggcgcatcgacctgggccgcaacatccgctccggcgcgcactacacg
cagttccaggtctacgactacgacggtgacggcaaggcggaggtcgccatgaagaccgcc
gacgccacggtcgacgggacgggcgcggtgatcggcagtccgtcggccgaccaccgcaat
tcctccggctacgtcctctccgggcccgagtacctgaccatgttcaacgggcagaccggc
agggcgatgggcacggtggactacgtcccggcccgggggacggtctcctcgtggggcgac
tcctacggcaaccgcgtcgaccggttcctcgccggcaccgcctacctggacggctcccgc
ccctcgctgatcatggcccgcggctactacacccgtacggtcatcgccgcctgggactgg
cggaacggcgccttcacccgccgctggaccttcgacaccaactcctccaccaacagtggc
aagggcttcgacggccagggctcgcacagcctgtccgtcggggacgtcgacggcgacggc
agggacgagatcgtgtacggcgcgatggccgtcgacgacaacggaggcggcctgtggacc
acgaagaccggtcacggcgacgcccagcacctcgctgacctcgacccctcgcacgcggga
ctcgagtacttcaaggtctccgagtcgacgagccagcccgccgagctgtacatcaacccg
gcgaacggcaccgtgaactggaagctcgccgcctgctgcgacaacggccggggcgtggcc
ggggacatctacgcgggcaacgacggtgccgaggtctggtccgcctccgacacctccgtc
cgcgacgaggccggcgccaccaagggccgcgagccgtcgtccgtgaacttcctgtcctgg
tgggacggcgacaccgtccgcgaactcctcgacggcactcacatcgacaagtacggcacc
tcgtccgacacccgtctgctgaccggctcaggtgtctcctccaacaacggcaccaaggcc
acacccgtgctgtccggcgacatcctcggcgactggcgcgaggaggtcgtctggcgcacc
agcggcaacacggccctgcgcatccactccacgccgtacgagacgaacacgaggatcacg
accctgctccacgacacgatgtaccgcacggggctttcgtggcaaaacactgcatataac
cagccgccacaccccagcttcttcctcggcaacgggatggggacggcgccgaggcccgcg
gtgtacacaccgtga
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