Streptomyces moderatus: POD33_27305
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Entry
POD33_27305 CDS
T10886
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
smod Streptomyces moderatus
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smod03051
]
POD33_27305 (pafA)
Enzymes [BR:
smod01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
POD33_27305 (pafA)
Proteasome [BR:
smod03051
]
Prokaryotic proteasome
Bacterial regulatory particles
POD33_27305 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
WCH95648
LinkDB
All DBs
Position
6047434..6048795
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFCERRGIRTGTV
EQVLELWGRTLDSIESEDLDRIGTEIDWVMKYKLIERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLEKKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacatgtacgttcagggga
cagcggcgcctgtctcccgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtctttctgcgaaacggcgcccgcctctatctcgacgtgggatcg
catccggaatacgccacaccggaatgtgacaacgtgaccgaactggtcacccacgacaaa
gcgggcgagcgcattctcgaaggactcctggtggacgccgaacgacgcctgcacgaggag
ggaatcgcgggcgacgtctacctcttcaagaacaacaccgactcggccggcaactcctac
ggctgccacgagaactatctcgtggcgcggcacggagagttctcccggctcgcggacatc
ctcattccgttcctggtcaccaggcagcttctctgcggcgccggcaaggtgctgcagacc
ccgcggggcgcggtgtactgcgtcagccagcgggccgagcacatctgggagggcgtctcc
tcggcgacgacccgctcccggccgatcatcaacacgcgcgacgaaccgcacgcggacgcg
gagcgctaccgccgtctccacgtcatcgtgggcgactcgaacatgtccgagacgaccatg
ctcctcaaggtcggcgccaccgacctggtgctgcgcatgatcgaggcgggcaccgtgatg
cgcgacctgaccctggagaaccccatccgggcgatccgcgaggtcagccacgacatcaca
gggcggcgcaaggtgcgcctggccagtggccgcgaggcctccgcgctcgaggtgcagcgc
gagtactacgagaaggccgtggacttctgcgagcgccgcggcatccgcaccggcaccgtc
gagcaggtcctggagctgtggggccgcaccctggactcgatcgagtccgaggacctcgac
cgcatcggcaccgagatcgactgggtcatgaagtacaagctcatcgagcggtaccgggcc
aagcacaacatgaccatgtcgcatccgcgggtcgctcagatagacctcgcctaccacgac
atccaccggcgtcgtggcctctactacctgctggagaagaagggtcaagcggcgcgcatc
tgcaacgacttgaagatcttcgaaggcaagtccgttccgccgcagaccactcgggcccgg
ctgcgcggcgatttcatccgcagggcccaggaacagcgccgcgacttcaccgtcgactgg
gtccacctcaagctcaacgaccaggcgcagcgcaccgtcctgtgcaaggacccgttccgt
tcggtggacgaccgggtggagaaactcatcgccggaatgtga
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