Streptomyces moderatus: POD33_27350
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Entry
POD33_27350 CDS
T10886
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
smod Streptomyces moderatus
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smod03019
]
POD33_27350
Enzymes [BR:
smod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
POD33_27350
Messenger RNA biogenesis [BR:
smod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
POD33_27350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
ENT
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
WCH95657
LinkDB
All DBs
Position
6054735..6057584
Genome browser
AA seq
949 aa
AA seq
DB search
MIVLLSVAPGTLESTMTEDLSPAERYAAAHRRAAEQATALASFREMYDFGLDPFQIEACQ
ALETGKGVLVAAPTGSGKTIVGEFAVHLALMQGKKCFYTTPIKALSNQKYADLCRRYGNG
MVGLLTGDNSVNPDAAVVVMTTEVLRNMLYAGSQTLLGLGYVVMDEVHYLSDRFRGAVWE
EVIIHLPESVTLVSLSATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLFQHVLAGRRMYD
LFEEGEGSKKAVNPDLARLARMEATRPSYQDRRRGRAMREADRERERRQRSRVWTPGRPE
VIERLDAEGLLPAITFIFSRAACEAAVQQCLHAGLRLNDDEAREKVRSLVEERTASIPTE
DLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPAR
SVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMSPDHLAGLAGT
RTYPLRSSFKPSYNMAVNLVEQFGRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLE
GYKESMTCHLGNFEEYAQLRRELKDRENELARQGAVERRAEAAVALEKLKPGDVIHVPTG
KYAGLALVLDPGLPAGRSNGHRGFEHHDGPRPLVLTAERQVKRLASMDFPVPVEALERMR
IPKSFNPRSPQSRRDLASALRTKAGHISPDRHRKRRSQAADDREIDRLRKALRAHPCHGC
NEREDHARWAERYHRLLRDTSQLERRIEGRTNTIARTFDRIVALLTELDYLRGDEVTEHG
KRLARLYGELDLLASECLRERVWEGLGPAELAACVSALVYEARVGDDAMAPKLPSGKAKA
ALGEMVRIWGRLDALEEDFRITQTEGVGQREPDLGFAWAAYMWASGKGLDEVLREAEMPA
GDFVRWCKQVIDVLGQISAASPSDSTVGKSARKAVEGLLRGVVAYSSVG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcctgttgtcagtggcgcccggtacgctcgaaagcacgatgacagaggacctc
tcaccggccgagcggtatgcggcagcacacaggcgcgccgccgagcaggccaccgcgctc
gcctccttccgcgagatgtacgacttcggcctcgaccccttccagatcgaggcatgccag
gcgctcgagacggggaagggcgtgctggtggccgcgcccaccggctccggcaagacgatc
gtcggcgagttcgccgtccacctcgccctgatgcagggcaagaagtgcttctacaccacc
cccatcaaggcgctgtcgaaccagaagtacgccgacctgtgccgccgttacggcaacggc
atggtcggcctgctgaccggcgacaacagcgtcaaccccgacgccgcggtggtcgtgatg
accaccgaggtcctgcggaacatgctgtacgccgggtcccagaccctcctcggcctcggc
tacgtggtcatggacgaggtgcactacctctccgaccgcttccgcggcgccgtatgggaa
gaggtgatcattcaccttcccgagtcggtcaccctcgtctcgctgtcggcgaccgtgtcc
aacgccgaggagttcggcgactggctcgacaccgtccgcggtgacaccgaggtcatcgtc
tccgagcaccggccggtgccgctgttccagcacgtgctcgccggacgccggatgtacgac
ctgttcgaggagggcgagggcagcaagaaggccgtcaaccccgacctcgcacggctggcc
cgcatggaagcgacccggccgtcctaccaggaccgcagacgcggccgcgccatgcgcgag
gccgaccgggagcgcgagcgcagacagcgctccagggtctggacgcccgggcggcccgaa
gtcatcgaacgcctcgacgccgagggcctgctgcccgccatcaccttcatcttcagccgc
gccgcctgcgaggccgccgtccagcagtgcctgcacgcggggctgcggctgaacgacgac
gaggcccgggagaaggtgcgttccctcgtggaggagcgcaccgcgtccatcccgacggag
gacctgcacgtcctcgggtactacgagtggctggagggcctagaacgcggtatagccgcc
caccacgcgggcatgctgccgaccttcaaggaggtcgtcgaggagctgttcgtccgcggc
ctggtcaaggccgtgttcgccaccgagaccctcgccctcggcatcaacatgcccgcgcgc
tcggtggtgttggagaagctcgtcaagtggaacggcgagcagcacgccgacatcaccccg
ggcgagtacacccagctgaccggtcgtgcgggccgccgcggcatcgatgtcgagggacac
gccgtggtgctgtggcagcgcggcatgagcccggaccacctcgcgggtctggccggcacg
cgcacctatccgctgcgctccagcttcaagccgtcgtacaacatggcggtcaacctcgtc
gagcagttcgggcggcaccgctcgcgcgaactgctggagacgtccttcgcgcagttccag
gccgacaagtcggtcgtcgggatctcgcgccaggtgcagcgcaacgaggaggggctggag
ggctacaaggagtccatgacctgccacctcgggaacttcgaggagtacgcgcagctgcgc
cgcgaactgaaggaccgcgagaacgagttggcccgccagggcgcggtggagcgccgcgcg
gaggccgccgtagcgctggagaagctcaagccgggagacgtcatccatgtgccgaccggc
aagtacgccgggctcgcgctggtgctcgacccggggctgccggcgggccgctccaacggc
caccgcggcttcgagcaccacgacgggccgcgcccgctggtcctgaccgccgagcggcag
gtcaagcggctggcgtcgatggacttcccggtgcccgtggaggcgctggagcggatgcgc
atcccgaagtccttcaacccgcgctccccgcagtcccgtcgggacctggcgtccgcgctg
cgcaccaaggccgggcacatctcgcccgaccggcatcgcaagcggcgctcccaggccgcg
gacgaccgggagatcgaccggctgcgcaaggccctgcgagcgcacccctgccacggctgc
aacgagcgtgaggaccacgcccgttgggccgagcgctaccaccggctgctgcgggacacc
tcgcagctggagcgccgtatcgaaggccgcacgaacacgatcgcgcgcaccttcgaccgc
atcgtcgcgctgctgaccgagctggactatctgcgcggcgacgaggtgaccgagcacggc
aagcgcctcgcgcggctgtacggcgaactcgacctgctggccagcgagtgcctgcgggag
cgggtgtgggagggcctcggcccggccgaactggccgcctgtgtctcggcgttggtgtac
gaggcgcgggtcggggacgacgcgatggccccgaagctgccgtcgggcaaggccaaggcc
gcgctgggtgagatggtgcggatctggggccggctggatgctctggaggaggacttccgg
atcacccagaccgagggcgtcgggcagcgtgaaccggatctgggctttgcctgggccgcc
tatatgtgggccagcggcaaggggttggacgaggtgctgcgggaggcggagatgccggcc
ggcgacttcgtgcggtggtgcaagcaggtgatcgatgtgctggggcagatctcggcggcg
tctccttcggactcgaccgtggggaagagcgcgcgcaaggccgtcgaggggctgctgcgg
ggggttgtcgcctactcgtcggtggggtga
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