Streptomyces moderatus: POD33_33195
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Entry
POD33_33195 CDS
T10886
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smod Streptomyces moderatus
Pathway
smod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
POD33_33195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smod03021
]
POD33_33195
03400 DNA repair and recombination proteins [BR:
smod03400
]
POD33_33195
Enzymes [BR:
smod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
POD33_33195
Transcription machinery [BR:
smod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
POD33_33195
DNA repair and recombination proteins [BR:
smod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
POD33_33195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WCH96733
LinkDB
All DBs
Position
complement(7362149..7363171)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLVLPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLAFKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgctgattgctcagcgtccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggttacaccctcggcaactctcttcgccgc
acccttctgtcctcgatccccggcgccgctgtcaccagcattcgcgtcgacggcgtgctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtacacaac
cccgacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggttacgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cggatcccggtcgactcgatctactcgccggttctgaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccgcgtgacgccatggcgtcggccggcaagacgctggtcgagctgttcggt
ctggcgcgcgagctgaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctcgccgccgacctggtactgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggctcgttccgag
gccgacctgctggacatccgcaacttcggtgcgaagtccatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccttcaaggacagcccgcccggattcgaccccacggccgct
gccgacgccttcggcgccgacgacgacgcggacgcgggcttcgtggagaccgagcagtac
tag
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