Solobacterium moorei: RGT18_09070
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Entry
RGT18_09070 CDS
T09707
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
smoe
Solobacterium moorei
Pathway
smoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGT18_09070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smoe03019
]
RGT18_09070
Enzymes [BR:
smoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RGT18_09070
Messenger RNA biogenesis [BR:
smoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RGT18_09070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
Flavi_DEAD
Utp25_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
BET21319
LinkDB
All DBs
Position
919632..921011
Genome browser
AA seq
459 aa
AA seq
DB search
MNFTDLELKEPILSAVNKAKYETPSPIQEKAIPVMLEGKDIVACAQTGTGKTAAFALPIL
NKLEYKKKHQIRALVLTPTRELAVQIFENFKKFGRYLKLRACCVYGGAPSSPQRKALRSG
CDILIATPGRLNDFMVQGEIVLSDIEVFVLDEADRMLDMGFIGDVRTIASRIPEARQTVM
FSATMPKEIKELANELLHDPVDIRVAPPASPAETITQYLVYCEKADKKRVLKDMLVSPEV
TKAIVFTRTKIGADRLTKKLIEDDIKVLTIHGDKTQGQRQNALQRFRTNQVDVLVATDVA
ARGIDISGISHVFNYDLPEEDESYIHRIGRAGRAGKEGISISLCCHEELGLLVSIEKMLK
KEIPLIRTEYSTELKRKKASDDKSNQRPSFKKKLDSRSGSDKSKKRDKNKRDNKKKCDDG
ASNKSIHKSTKPNKSRKPTDRKPRHQTKSYKPRRKNRDR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacagatttagaacttaaggagccgatactgagtgccgtcaataaggcaaag
tatgaaacaccatcaccaatccaagaaaaagcaatccctgttatgttggaaggcaaggac
atcgttgcctgtgctcaaactggtacaggtaagacagccgctttcgcattaccaatttta
aataagcttgaatataagaagaaacatcagattcgtgctttagtattaacacctacacgt
gagttagctgtacaaatcttcgaaaactttaaaaagtttggaagatatttgaagttacgt
gcttgttgtgtatatggtggtgcaccatctagcccacaaagaaaagcactccgtagtggt
tgtgatattttgattgcgactccaggtcgtttaaacgactttatggttcagggtgagatt
gtcttgagtgatattgaagtatttgtacttgatgaagcagatcgtatgttggatatggga
tttattggggatgtacgtacaatcgccagccgtattccagaagctcgtcaaactgttatg
ttctctgcaacaatgccaaaagaaatcaaagaattggcaaatgaactattacatgatcca
gtggatattcgtgtggctccaccagcaagcccagctgaaacaattacacagtatcttgta
tactgtgaaaaagcagataagaagcgtgtactaaaggatatgcttgtaagtcctgaagtt
acaaaggccattgtatttacaagaacaaagattggtgccgatcgtttaactaagaagtta
atagaagatgatatcaaagttcttacaatccatggtgataaaacacagggccaacgtcag
aatgccttgcagcgatttagaacaaatcaagtagacgtgttggttgcgacagatgttgcg
gcacgtggtatcgatatttcaggtatttcacatgtattcaactatgatttaccagaggaa
gatgaatcttatatccaccgtattggtagagctggaagagctgggaaagagggtatttct
atttctctatgttgtcatgaagaactaggcttgcttgtgtcaattgaaaagatgttaaag
aaagagattccgttaatcaggacagaatactctaccgaattaaaacgtaaaaaagcaagt
gatgataaatcaaatcaacgaccatcatttaagaagaagttagattctcgaagtggtagt
gataagagtaagaagcgtgataaaaacaagcgtgataacaaaaagaaatgtgatgatggt
gcatcgaataaatcgatacataaatctacaaagccaaataagtcacgtaagcctactgat
agaaagccacgtcatcaaacaaagagttacaagccaagaagaaagaatcgtgatcgataa
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