Solobacterium moorei: RGT18_11610
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Entry
RGT18_11610 CDS
T09707
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
smoe
Solobacterium moorei
Brite
KEGG Orthology (KO) [BR:
smoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smoe03019
]
RGT18_11610
03009 Ribosome biogenesis [BR:
smoe03009
]
RGT18_11610
Enzymes [BR:
smoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RGT18_11610
Messenger RNA biogenesis [BR:
smoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RGT18_11610
Ribosome biogenesis [BR:
smoe03009
]
Prokaryotic type
rRNA helicases
RGT18_11610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
NAT10_TcmA_helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
BET21573
LinkDB
All DBs
Position
1175804..1177171
Genome browser
AA seq
455 aa
AA seq
DB search
MKKFEDFNLKDTTMAFIEKNHFKQPTPIQEQVIPSALRGKDVIGLSSTGSGKTHAYLIPI
MEKVDPNKDEAQVIITAPTRELATQIYEMAKVMTEVIPELRVRLYVGGRERSKDVEQLEK
SQPHIVVGTPGRIKDLFLNGGTLRIDKAIMLVVDEADMTLEYGFLDEIDAFAGRLGDHLQ
MLAFSATMPDQLKPFINKYMHHPITYQIGEKVRFNPDIKHVLVPCYHHSYAETILSILPG
FQPYVCLIFANTRQEASAIAEELRKNKVSVSEIHGDLTSRKRKQAMKSISNAEHTYVVAT
DLAARGIDIGEVTHIISCGFPEDLEYYIHRAGRTGRAGSKGTCYALYQESDDQAIRSLQK
RGIKFEHARHRTSGWQTLHPYGQRRLKTDDELEKKIAMIMTKKSTKVKPGYKKKRAAAID
RVHRQKKREMIRSKIREEKKAMYKERARKDREGLS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttgaagattttaatctaaaagatacaacaatggcctttattgagaagaac
catttcaaacaaccaacaccaatccaagaacaggtgattccatctgctttacgtggcaag
gatgtgattggtctttctagtacaggctctggtaagacacatgcatacttaattccaatt
atggagaaggtagaccctaataaggatgaagcacaggtgattattactgcaccaacacgt
gaacttgcaacacagatttatgagatggcgaaagttatgacagaagttattcctgaactt
cgtgtacgtttatacgttggtggacgtgagagaagtaaggacgttgagcaacttgaaaag
tctcaaccacatatcgttgtcgggacaccaggtagaattaaggacttattcctaaatggt
ggtactttgcgtattgataaagcaatcatgcttgtggtggatgaagcagatatgacactt
gagtatggattcttagatgaaattgatgcctttgcaggaaggctgggtgaccatttacag
atgcttgcattctcagcaacaatgccagaccagttaaagccatttatcaataagtacatg
catcatccaatcacatatcagattggtgagaaagtacgctttaatccagatattaagcat
gtgttggtaccttgttatcatcatagctatgcagagacgattttatcaatcttgcctggc
tttcaaccatatgtatgtttaatctttgctaatacacgtcaagaagcttctgcaattgcg
gaagaacttcgcaagaacaaagtatctgtcagtgaaattcatggtgatttaacaagtcgc
aagagaaagcaagcgatgaagagtatttccaatgcggaacatacatacgtcgttgcgact
gacttagctgcacgtggtattgatattggagaagtaacacatattatttcttgtgggttc
ccagaagacttagaatactatattcatcgtgcaggaagaacaggtagagcaggttctaaa
ggtacatgctatgccttgtatcaagaaagtgatgatcaagcaattcgttccttacaaaag
cgtggtattaagtttgagcatgcccgtcatcgtactagtggttggcagacactacatcca
tacggacaaagacgtcttaagacggatgatgaactagaaaagaagattgctatgattatg
acgaagaagagtacaaaggtaaaaccaggctataagaagaaacgtgcagctgccattgat
cgcgtacatcgtcagaagaaacgtgaaatgattcgtagcaagattcgtgaagagaaaaag
gctatgtataaagaacgtgcaagaaaagatagagaaggactttcataa
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