Solobacterium moorei: RGT18_11890
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Entry
RGT18_11890 CDS
T09707
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smoe
Solobacterium moorei
Pathway
smoe03030
DNA replication
smoe03430
Mismatch repair
smoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGT18_11890 (dnaE)
03430 Mismatch repair
RGT18_11890 (dnaE)
03440 Homologous recombination
RGT18_11890 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smoe03032
]
RGT18_11890 (dnaE)
03400 DNA repair and recombination proteins [BR:
smoe03400
]
RGT18_11890 (dnaE)
Enzymes [BR:
smoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGT18_11890 (dnaE)
DNA replication proteins [BR:
smoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGT18_11890 (dnaE)
DNA repair and recombination proteins [BR:
smoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGT18_11890 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BET21601
LinkDB
All DBs
Position
1202237..1205302
Genome browser
AA seq
1021 aa
AA seq
DB search
MTTHLFVRSCYTLLDSTIRIPELVSTAKKYGYQSVALTDHHVMHGVARFLHECKKEGIHP
IIGLEVDVFYHEQKVPFLLLAKNNKGYTNLMKLSSMLCDGREYATYEELIQYCEHNFLVV
YGEGGYFDAELISEDRTGITQKLALMKSEFPPFDIAISYEETSLWRSKNAVLKALAKAQG
IQTIALNKIYYLGQKDYETLKVLSAIKQGTTLRDKNVTPITGRYFLSIPEMEQIYDADDL
RRTDEIASECHCDGNLEKTGIPEYPLKDGITAEQYLPQLCLAGLKKRLNGDLKPAYVERL
KYELQVIHQMGFEDYFLIVYDFIRYGRQKGIYIGPGRGSAAGSLVAYCLGITMVDPLQYN
LLFERFLNAERVSMPDIDTDIPDIHRQEIIDYVYQKYGEQHIANIITFDTLAARAVLRDV
GKAMDISKREIDMIVGLIPQTPKITLKKAYEQKEKLRVLLNASPQLMTYFNMAKRIEGLP
KNKSIHAAGIVMSGKPIEEIIPTIQMAEGMKTTQFAGNYLEERGLIKMDFLGLKNLTTID
EIVLMIHKKNPDFHILSIPLHDAKTYRLFAQADTIGVFQFESDGMRNLLRKMKPNCFEDI
IAALALFRPGPKDQINVYLEGRKNPSSVVYPSKELEPILKETYGVTIYQEQVMLMAQIAA
KFSLVKADILRKAISKKNEEELAGLRQEYVRGCKENGYSDETASYLFDLAEKFAGYGFNK
SHAVAYGLVAYQLAYLKANYPLEFYTSILNSVIGDSTKSAIYITECRRKHISIEAPDVNR
STDIYYHNGKSIILPLSIIKDVGTLAARTILDERDKKGSFGDYFDFVARAVLRKINRTQL
ERLISAGALDCFDLGRTTMMNTLDDAVKYAKLVQVPFGTQLSIDPQLVSKPVVVRMKDSQ
EELSENEKAALGFNLGEQPIVHLRQKLGITYPPLAELNSNRGLYRGFAYIQSVRQIRTRK
GDLMCFLKLTDETGESDMAVMPNLYSQYGQYLVKGVYIQFYAKIQDEASFLANQIEIVRQ
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgactacacatctattcgtacgtagctgttacacgttactggatagcacaattcgcatt
ccagagcttgtttcaacagcgaaaaaatatggatatcaaagtgttgctttgaccgaccat
catgtgatgcacggcgtagcgcgttttctgcatgaatgcaaaaaagagggaattcatcct
atcataggattagaagttgatgttttctatcatgaacaaaaagttccttttttactactt
gctaaaaataataaaggctatacaaatttgatgaagctttcttctatgctatgtgatgga
agagagtatgcaacatatgaagaactgattcaatactgtgaacataatttccttgttgtg
tatggtgaaggtggatattttgatgcagaactcatcagtgaagatcgtacaggaattaca
cagaaattagcgctgatgaaatcagaattccctcctttcgatattgcaatttcttatgaa
gaaacatctttatggcgctctaagaatgcagtgttaaaagcgttagcgaaagcacaagga
attcagacaattgctttaaataaaatctattatcttggacaaaaagattatgaaacatta
aaggtattatccgcaatcaaacagggtacaaccttgcgtgacaagaatgtgacaccaatt
acaggaagatacttcttatcaatccctgaaatggaacagatatatgatgcggatgattta
cgtaggacagatgaaatcgcaagcgaatgtcattgcgatgggaatctagaaaagacaggg
atacctgagtatccattaaaagatggtatcacagcagagcaatacttaccgcaattatgt
ctagcaggattaaagaaacgtttaaatggtgatttaaaacctgcgtatgtagaacgttta
aaatatgaattacaagtcattcaccagatgggctttgaggattatttcttgattgtctat
gactttatccgttatggaagacaaaagggaatttatattggaccaggaagaggtagtgct
gctggttctttggttgcgtattgcttaggaattacgatggtagaccctttacaatataat
cttttgtttgaacgtttcctcaacgctgaacgtgtatctatgccggatattgacacagat
atcccagatatccatcgccaagaaattattgattatgtatatcaaaagtatggtgaacaa
catattgctaatatcattacatttgatactttagcagcgcgtgctgtcttacgtgatgtt
ggtaaagcaatggatatttcaaagcgagaaatcgatatgattgttggactgattccgcaa
acgccaaagattacgcttaagaaagcgtatgaacagaaagaaaaattacgtgtattactc
aatgcaagtccacaattgatgacatattttaatatggcaaagcggattgaaggacttcca
aaaaataagagtatccatgcggctggcatcgtcatgtcgggaaaaccaatagaagagatt
attccgacaatacaaatggcagagggaatgaagacaacacagtttgctggaaattacttg
gaggaaagaggccttattaagatggacttccttgggcttaagaatctaacaacgattgat
gaaatcgtactgatgattcacaagaaaaatccagattttcatatcctatctatcccactt
catgatgcaaaaacatatcgtttatttgcgcaagcagatacgattggagtcttccagttt
gaatcggatggcatgcgtaatttattgcggaagatgaagccgaattgttttgaagatatt
attgcggcgttagcactctttagaccgggtcctaaagatcagatcaatgtctatctagaa
ggtagaaagaatccatcgtcggttgtatatccatccaaggaattggagccaattctaaag
gaaacctacggtgttacaatctaccaggaacaagttatgttgatggcacagattgcggcg
aagttctcactagtgaaagcagatattcttcgtaaggctatttcaaaaaagaatgaggaa
gaattagctggattaagacaagagtatgtacgtgggtgtaaagagaatggctatagtgat
gaaacggctagttatctctttgatttagcagagaagtttgcggggtatggttttaataag
tcacatgcggttgcgtatggcttggttgcgtatcaattggcatatctaaaggcaaactat
ccattggagttttatacatctatcttaaatagtgtgattggagatagtaccaagagtgca
atctatattactgagtgtagaagaaagcatatctctatcgaagcgcctgatgtaaatcgc
tccacagatatttattatcacaatggaaagtcgattattttaccactatctatcatcaaa
gatgtcggaacattagccgctagaacaatcttggatgaacgcgataagaagggaagtttt
ggcgattactttgactttgtcgcaagagctgtattacgcaagattaatcgaacacagcta
gaacgtttgatatctgcaggtgcactagattgttttgatttaggtagaaccacaatgatg
aataccttagatgacgcagtcaagtatgcaaaattggtacaagttcctttcggaacacaa
ttatccattgatccacaacttgtatctaaaccggttgtggttcgtatgaaggatagtcaa
gaagaactcagtgaaaatgaaaaagcagcacttggatttaatctgggtgagcaaccaatt
gttcatttaagacaaaaactaggaattacgtatccgccacttgcggaattaaatagtaat
cgaggtttataccgtgggtttgcgtatattcaaagtgtaagacaaattcgtactcgtaag
ggagatttaatgtgtttcttaaaactaacagatgaaacaggtgaaagtgatatggcggta
atgccaaatttatattcacaatatggtcagtatcttgtaaaaggggtttatattcagttt
tatgctaaaattcaagatgaagcatcctttttagcaaatcaaatagaaatagtaaggcag
aaatag
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