Spirosoma montaniterrae: AWR27_12095
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Entry
AWR27_12095 CDS
T04702
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
smon
Spirosoma montaniterrae
Pathway
smon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWR27_12095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smon03021
]
AWR27_12095
03019 Messenger RNA biogenesis [BR:
smon03019
]
AWR27_12095
Transcription machinery [BR:
smon03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AWR27_12095
Messenger RNA biogenesis [BR:
smon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AWR27_12095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_25
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AQG80003
UniProt:
A0A1P9WXD2
LinkDB
All DBs
Position
2809549..2811732
Genome browser
AA seq
727 aa
AA seq
DB search
MYNKEELSMKLLSELQPIAEQFGIRDSAKYTKEKLIYKIIDEQSKKPVSAAEEEAIAQPA
RRGRRPKAVQAEAETPAPIAPPAEQTEQAATEDTETVPPVARTRQRARRDAGASDIPAPT
PEDGMTPQTESPVAESTPTETAPAENTAPTADSEPAVAPVDRPITEPAPPTRPRFDGRVP
NQPNGQRNAPNNQQQPRMRNDRDNRNGGGPPRFDNDRQQRDQRPMRPDSNIGNQRDTNSG
RPRPDGGRRDGGPGQRPRTQRVVTDETALNYGGQPDEEFLTPTVVSDDNAANMEAAVVPT
APAVEGDQSPTDISAESQTGDASAMAQQPQLPQPSREAQEYQNRIRRQYNQHIREFDGII
ENEGVLEIMSDGGYGFLRSADYNYLASPDDIYVSPSQIKLFGLKTGDTVKGAIRPPKEGE
KYFALLRVTTVNGKTTEEIRDRIPFEYLTPLFPEEQLHLSNRPENYSSRVLDLFAPIGKG
QRGMIVAQPKTGKTVLLKEIANAITRNHPEVYLIVLLIDERPEEVTDMARSVNAEVISST
FDEQADRHVKVSSMVLEKAKRMVECGHDVVILLDSITRLARAYNTVVPSSGKILSGGVDA
NALHRPKRFFGAARNVENGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKLAN
KRVYPAVDVLSSGTRREDLLLDKETLQRVWILRKHMADMNPMESMEFLLDRMRGTRTNEE
FLISMNR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaaagaagaactaagtatgaagctcttatctgagcttcaaccaattgccgag
cagttcggtattcgagatagtgcgaaatacaccaaagaaaaattgatttataaaattatc
gacgaacagtcgaagaaacccgtttccgcagccgaggaagaagctattgcacagcctgcc
cggcgtggtcgacgccctaaagccgtacaggccgaagccgaaacgcccgcgccgattgcc
cctcctgccgagcaaaccgagcaggcagcaaccgaagataccgaaacagtacccccggtt
gcccgcacccgtcagcgtgcccggcgcgacgctggcgcatcggacatcccggctcctacg
ccagaagatggcatgacgccccaaaccgaaagccctgttgccgaatcaacgccaacagaa
acggcacccgctgaaaataccgctccaactgccgattcagaaccagcggtggctccggtt
gatcgcccgataaccgaaccggctcctcctacgcgaccccgctttgacggacgggtgccc
aatcagccgaacggtcagcgcaacgcgccgaacaatcagcaacagccgcgtatgcgcaat
gatcgggataaccgcaacggtggtggcccaccgcgattcgataacgaccgacaacagcgc
gatcagcggcctatgcgccccgatagcaatataggaaatcagcgggatacaaacagcgga
cggccccgccccgatggtggtcggcgcgacggtggccctggtcagcgaccccgcacgcag
cgcgttgtgaccgatgaaaccgcactcaactacggtggtcagcccgacgaggagtttctg
acaccaacagtggtatcagacgacaatgcagccaatatggaagcagcggttgttccaacg
gccccggcagttgaaggcgatcagtctccaaccgacatatctgctgagagtcagactggt
gatgcgtcggctatggcccagcagccgcagttaccccaaccttcacgcgaagcccaggag
taccagaatcgtatccgtcggcagtataatcagcacattcgcgagttcgatggcattatt
gaaaacgaaggggttctggaaattatgtccgatgggggctacggcttcctgcggtcggca
gattacaactaccttgccagccccgatgatatttacgtatcgccttcgcagatcaagctt
ttcggcctgaaaaccggcgatacggtgaaaggagcaatccgcccgccgaaagaaggcgaa
aaatattttgccctgttgcgggtaacgaccgtaaacggcaaaactaccgaggaaattcgc
gaccggattccgtttgagtatctgacgcccttgttccccgaagagcaactgcacctcagc
aaccgacccgaaaactactcttcgcgtgtactcgacctgtttgcccctatcggcaaaggg
cagcggggtatgattgtggcacagcccaaaaccggtaaaacggtgctgctcaaggagatt
gccaacgccattacgcgcaaccacccggaggtatatctgattgtgctgctgattgacgaa
cgcccggaagaagtgaccgacatggcccgcagcgtcaatgccgaagtgatttcgtcgaca
ttcgatgagcaggccgaccggcatgtgaaagtatcgagcatggtgctggaaaaagccaag
cgtatggtcgaatgcggtcacgatgtggtgattctgctcgattcgattacgcgtctggca
cgggcctacaacacggtggtgccatcgtcgggtaagattctgtcgggtggtgtcgatgcc
aatgcgctccaccggcccaagcggttcttcggcgcggcccggaacgtagaaaacggtggt
tcgctcaccattatcgctacggctctgattgataccggctcgaaaatggatgaggtgatt
tttgaagaattcaaaggcaccggcaatatggaacttcaactcgaccgcaagttggccaac
aagcgcgtttaccccgccgttgatgttttatcgtcgggtacgcgccgggaagatttgctg
ttggacaaagaaacgctacagcgcgtctggattctgcgtaaacacatggccgacatgaac
ccaatggaatcgatggaattcctgctcgaccgtatgagaggcacccgtactaacgaagaa
ttcctgatttcgatgaaccgctaa
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