Spirosoma montaniterrae: AWR27_12650
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Entry
AWR27_12650 CDS
T04702
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
smon
Spirosoma montaniterrae
Pathway
smon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWR27_12650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smon03019
]
AWR27_12650
03009 Ribosome biogenesis [BR:
smon03009
]
AWR27_12650
Enzymes [BR:
smon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWR27_12650
Messenger RNA biogenesis [BR:
smon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWR27_12650
Ribosome biogenesis [BR:
smon03009
]
Prokaryotic type
rRNA helicases
AWR27_12650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UBA
Cas3-like_C_2
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AQG80101
UniProt:
A0A1P9WXL4
LinkDB
All DBs
Position
complement(2944863..2947055)
Genome browser
AA seq
730 aa
AA seq
DB search
MKTKKTKADAQDDLLTLDQIEQVAQQMAAAATPATDATAETPKKKAAKPRTKKTEDTPAI
DEMPMAEIVENEPVQAEQVQEELVQTEPVQAEVSPVLIAQPVASATAPAKTEPAVPLFSD
LAISDEILQAVTDMGFVSPSPIQAEAIPPILAGRDVIGQAQTGTGKTAAFGIPALDLIDT
QDRSVQVLVLCPTRELALQVSEEIRKLAKYKRGVRIEAIYGGDSIERQIRSLKSGVHIVI
GTPGRVMDHMERNTLKLDNVKMMILDEADEMLDMGFREDIESILEDMPEERQTILFSATM
SKPIMQITQKFQKDPVLVKVVKRELTNTNIEQVYFEVKPKAKVEVMCRLIDMYDLKLMLV
FCNTKRKVDEIVEDLQIRGYQAEGLHGDLRQAQRNNVMGKFRSGTTSILVATDVAARGID
VDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSMVGRDEKYRFREIQSYTKVRVEK
GVIPSFEDIVGVRKARFIEQVQQTIQESKDLNLYEDTLTQLHHAGFSTEQVVAALVKRSM
GLEKNEFADQNLGLDDDRRREGPDRRGGDRYGDRDDRGGRFGDRTEGRGRFGDRAEGRGR
FGDRDDRGRGNDRDQGRFGRSEGADRPRFGDREDRRGGDRDRNEKRAPREREANMTRLMV
SIGRRDFVRPGDIVGAIAGEANIPGNTIGSIDIFDKHTYVDVPKDVANRVVDAMEGNTIK
GRRVNVEIAR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaaaaaaacaaaggccgatgcacaggacgatctcctgacgctcgaccaaatt
gaacaggtagcccagcaaatggccgctgccgctacgcccgcaaccgacgctactgccgaa
acgccaaagaaaaaagcagctaaaccccgcactaaaaaaacggaggacacccccgcaatc
gacgaaatgccgatggcggaaattgttgaaaacgagccagttcaggctgagcaagttcag
gaagaattagttcagactgaacccgtacaggccgaagtgtcgcccgttttaatagcacag
ccagttgcttcggcaacggctccggccaaaaccgaaccggctgtgccgctgttctctgac
cttgccatttcagacgaaattttgcaggccgtgaccgatatgggcttcgttagcccgtcg
ccgattcaggccgaagcgattccgcccattctggctggtcgcgatgtaattggtcaggcc
cagacgggaacgggtaaaacagccgcattcggtattcctgctctcgatttgatcgatacg
caggaccgttcggtgcaggtgcttgttctttgccctacccgcgaactggccctacaggtg
tcggaggaaatccgtaagcttgctaaatacaagcgcggtgtacgtatcgaagctatctac
ggcggtgattctatcgaacgtcagattcgctcactcaagtcgggcgtacacatcgtgatt
ggtacgccaggccgtgttatggaccacatggagcgtaacacgctcaagctcgacaacgtg
aagatgatgattcttgacgaggccgacgaaatgctggacatgggcttccgtgaagatatt
gaaagcatactggaagatatgcccgaagagcggcagacaatcctgttctcggctacgatg
tcgaagccgattatgcagattacgcagaaatttcagaaagaccctgtgttggtgaaggtg
gtcaagagagaactgaccaacaccaacatcgagcaggtctattttgaagtgaagccgaaa
gctaaagttgaggtgatgtgccggttgatcgacatgtacgacctcaaactgatgctggtg
ttctgtaatacaaagcgcaaagtcgatgagattgttgaagacctgcaaattcggggctat
caggccgaaggcttgcacggcgatctgcggcaggcacagcgtaataacgtaatgggcaag
ttccgctcaggtacaaccagcattctggttgccaccgacgtagcggcacgcggtatcgac
gtcgacgatgtcgacgcggttatcaacttcgatattccgctcgatgaagaatattacgta
caccgtattggccgtacaggccgggcgggtaagtcgggccgggcgttctcgatggtaggt
cgtgacgaaaaataccgtttccgcgaaattcagtcgtataccaaagtacgggtcgaaaag
ggcgttattccgtcgtttgaagacatcgtgggtgtgcgcaaagcccgctttatcgagcag
gttcagcaaaccattcaggagagcaaggatttgaacctctatgaagatacgctgacgcag
ttgcaccacgccggtttctcgaccgagcaggttgtggccgcgctcgtgaaacgcagcatg
ggcttagagaaaaacgaattcgccgaccagaatcttggccttgacgacgaccgccgtcgc
gaaggaccagaccgtcggggaggagatcgctacggcgaccgcgatgaccggggagggcgt
ttcggcgaccgcaccgaaggccgtggccgttttggcgaccgcgctgaaggtcggggccgt
ttcggcgaccgcgacgaccggggccggggtaatgaccgtgatcagggccgttttggccgt
agtgagggagcagatcgcccgcgctttggcgaccgcgaggatcgccgtgggggagatcgc
gaccgtaacgagaagcgggctccgcgcgagcgcgaagccaacatgacccgcctgatggtg
agcattggtcggcgtgattttgtgcgtccgggcgatattgtcggtgccattgccggtgag
gctaacattcctggcaacaccatcgggagcatcgatatcttcgacaagcacacctacgtt
gacgtaccgaaagacgtggctaatcgggtggtcgatgctatggaaggcaacaccatcaaa
ggtcgccgagtgaacgttgaaattgcgcggtaa
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