Spirosoma montaniterrae: AWR27_20170
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Entry
AWR27_20170 CDS
T04702
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
smon
Spirosoma montaniterrae
Pathway
smon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWR27_20170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smon03400
]
AWR27_20170
Enzymes [BR:
smon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AWR27_20170
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AWR27_20170
DNA repair and recombination proteins [BR:
smon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AWR27_20170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AQG81429
UniProt:
A0A1P9X1B9
LinkDB
All DBs
Position
complement(4729880..4730701)
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AA seq
273 aa
AA seq
DB search
MPELPEVEIRRQYLETSSLNQPIAHIEVEDRKLLTTDYNTLLTTLVGRQFTGTRRVGKNL
FVLTDAPDVIVHMHFGMTGDLEYYHASLDRPRFARIVFEFSNGFNLGFLCPRKFERVGLI
DSIDAFLERKKIAPDGLDISVNELSERIRRKKAFIKPVLLDQSVVAGLGNWIVDEVLFQA
RVHPEQRADTLTNEQLTALHDATRLVLETAIRHEATYRDFPNSFLIHVREWDDSPYDDVE
AHKFCPRCRTRIERSTVGGRTTFFCPKEQNIPV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagttgaaatccgacgacaatacctcgaaacatcgtcgcttaac
cagccgattgctcatatcgaagttgaagacagaaaacttctcaccaccgactataacaca
ttgctgaccacgctcgtggggcgacagtttaccggaacgcgccgggtaggcaaaaatctg
ttcgtattaaccgacgcgcccgacgtaatcgtacacatgcacttcggcatgaccggcgac
ctcgaatactaccacgcgtcgctcgaccggccccgctttgcccgcattgtgttcgagttt
agtaatggcttcaacctcggctttttgtgtccgcgtaagtttgagcgggttggcttaatc
gatagcatcgatgcgtttctggaacgcaagaaaattgcacccgacggcttagacatttcg
gtgaatgaactgagcgaacgcatccggcgcaagaaagcctttattaaacccgttttgctc
gatcagagcgtagtggccggattaggcaactggattgtggatgaggtgttgtttcaggcc
cgcgttcaccccgaacaacgcgccgacacactcaccaacgaacagctaaccgccctgcac
gacgccactcggctcgtgctggaaacggccattcgccatgaagccacctaccgcgacttt
ccgaacagttttctaattcacgtccgcgaatgggacgattcgccctacgacgacgtagaa
gcgcacaagttttgcccccgctgccgcacccgtatcgaacgctcaaccgttggtggacga
accacctttttttgcccaaaggagcaaaacatacctgtttag
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