Spirosoma montaniterrae: AWR27_20710
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Entry
AWR27_20710 CDS
T04702
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smon
Spirosoma montaniterrae
Pathway
smon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWR27_20710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smon03019
]
AWR27_20710
03400 DNA repair and recombination proteins [BR:
smon03400
]
AWR27_20710
Enzymes [BR:
smon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWR27_20710
Messenger RNA biogenesis [BR:
smon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWR27_20710
DNA repair and recombination proteins [BR:
smon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWR27_20710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HemN_C
ResIII
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
AQG82616
UniProt:
A0A1P9X4N2
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All DBs
Position
complement(4855399..4857270)
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AA seq
623 aa
AA seq
DB search
MQEDIINTVLERHDALVLMPTGGGKSLCFQVPALALRGVCIVVTPLIALMKDQVEQLRRR
GIPAAAIYSGMHYREIDTILDNCIYGNTKFLYLSPERLRTEIVIERVKLMPVCLLAVDEA
HCISQWGYDFRPPYLKIAEFRELIPDTPVIALTASATPDVQTDIVDKLAMRPANDGQVRI
FRQTFARPNLSYSAVLEENKEERLLKILNNVPGSGIVYVRSRRQTQQVAQLLQGAGVAAD
FYHAGLTTQQRADKQDAWIQDQIRVMVATNAFGMGIDKPDVRVVVHLNVPDSLEAYYQEA
GRAGRDGQKAYAVMLYTPADLDSLRFRTEQMHQPVAMLRRVYQALANYTAVPLGGGEFAS
YDFDMGAFTATFSLPAQETHYALQQLQLEGLIQLNEQYFHPSRLTILLDNRQLYEFQVMN
PKLDPFLKLLLRMYGGELFTDFVTIQESALARAYMLNQSEIEAMLTQLHQRNVVIYEKQK
DKPQLTYLTPRLDAPTLPIDIAELNRRKELAQRKVQAAILYTEHPTQCRTRLLQAYFGEK
PGDACGICDNCIKKKKSADRATSVVREQVRDYVALANGPGVSPKQLSHYFAQTDADTLAQ
TVQQMLAEEEIRYTKTGNLTLNG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagacataatcaacaccgtactcgaacggcacgatgcgctggtattgatgccc
acgggcgggggcaaatcgctttgctttcaggtgcccgcgctggccctgcggggcgtatgt
attgtggtaacgcccctgatcgcgctcatgaaagatcaggtcgaacaattgcgtcggcgc
ggtattccggcagcggccatctattccgggatgcactaccgcgaaatcgatacgatatta
gacaactgtatctacgggaacaccaaatttctgtatctctcgcccgaacggttacgcact
gaaatcgtgatcgaacgcgtgaagctgatgccggtttgcctgctggctgtcgacgaagcg
cactgtatttcgcagtggggctacgatttccgcccgccgtacctgaaaattgccgagttc
cgcgaactcattcccgatacgcccgtaattgccctcacggcctcggctacgcccgacgtg
cagaccgacattgtcgataagctggcgatgcgccccgccaacgacgggcaggtgcgtatt
ttccggcagacgtttgcccggcctaatctctcctattcagccgttctggaagaaaataaa
gaggaacgactactaaaaatcctgaacaacgtgccgggcagcggcattgtgtacgtgcgc
agccgccgacaaacacagcaggtggcgcagctactgcaaggggcgggcgtggccgccgat
ttttaccacgcgggtctgaccactcagcaacgtgccgataagcaggatgcctggattcag
gatcaaattcgggtgatggtagcaaccaacgcgttcggtatgggaatcgacaaacccgac
gtgcgcgtggtggtgcatctcaacgtgcccgactcgctcgaagcctactaccaggaagcg
ggtcgggccgggcgcgacgggcaaaaagcatacgccgttatgctctacacgcctgccgat
ctcgacagtctgcggttccgtaccgagcagatgcatcagccggtggcgatgttgcgccgg
gtatatcaggcgttggcaaattataccgccgtgccgctgggcgggggcgagtttgccagt
tatgatttcgacatgggcgcgtttacggctactttcagtctgcctgctcaggaaacgcac
tacgccctgcaacagcttcagttggaagggcttatccagttaaatgaacaatatttccac
ccgtcgcggctaacgattctgctcgataaccggcagttgtacgagtttcaggtcatgaac
cccaagctcgacccgtttctgaaactgctgttgcgaatgtatggaggtgagttgtttacc
gattttgtgaccattcaggaatcggcactggcgcgggcgtatatgctgaaccaaagcgaa
atagaagccatgctgacgcagttgcaccagcgcaacgtagtgatttatgaaaagcagaaa
gacaaaccgcagctaacgtatctgacaccccggctcgatgcccctaccctacccatcgac
atagccgagctgaaccggcgtaaagaactggcacagcgcaaagtgcaggccgccatactc
tacaccgaacacccaacgcagtgccgcacacgcctgctgcaagcttacttcggcgaaaaa
cccggcgacgcctgcggtatctgcgacaactgcatcaaaaagaaaaagagtgctgaccga
gctacgtcggttgtgcgcgaacaggtgcgcgattatgttgcgctcgccaacgggccgggc
gtttcgccaaaacagctatcgcattatttcgctcagaccgacgccgacacgctggcgcag
acggttcagcagatgctggcagaagaagaaatccggtacactaaaaccggcaatctgaca
ctaaatgggtag
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