Spirosoma montaniterrae: AWR27_21210
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Entry
AWR27_21210 CDS
T04702
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smon
Spirosoma montaniterrae
Pathway
smon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWR27_21210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smon03019
]
AWR27_21210
03400 DNA repair and recombination proteins [BR:
smon03400
]
AWR27_21210
Enzymes [BR:
smon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWR27_21210
Messenger RNA biogenesis [BR:
smon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWR27_21210
DNA repair and recombination proteins [BR:
smon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWR27_21210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
CsgE
DUF6806
DUF3747
DUF5027
Motif
Other DBs
NCBI-ProteinID:
AQG81606
UniProt:
A0A1P9X1U1
LinkDB
All DBs
Position
4977207..4979417
Genome browser
AA seq
736 aa
AA seq
DB search
MMQVDQTVYETLKERLKEIFGFSQFRGDQEAIIHSILSGRNTFVIMPTGAGKSLCYQLPA
IVNDGTAIVISPLIALMKNQVDQLNAFGINAQFLNSTLSKTEMNKVKKDTLNGSLKLLYI
APESLTKEENLDFLKKANISFVAIDEAHCISEWGHDFRPEYRKIRGIVDNIGNLPVIALT
ATATPKVQLDIQKNLQMEEANLYKTSFNRKNLYYEIKPKVDAKKQLIKYIKQNKGKSGIV
YCLSRKTVEEIAELLRVNDVRALPYHAGLDPQTRMANQDAFLNEDADVICATIAFGMGID
KPDVRFVIHYDAPKSLEGYYQETGRAGRDGLEGNCIMFYSYDDIVKLEKFNKDKPVTERD
NARHLLTEMVSYANLGTCRRRQLLGYFGEYLDKDCGFCDNCLKPTEKIKVQQEVVLALRT
VLQTDQRFDVAHLADVLTATGNQYVTSYEHDRLDVYGKGKEFNEDCGWWCSLIKQIAILG
YLEKDVDNYGVLKLTQKGLNYIEDPYPVTLAKDHDYDQQVADQTTDDDKDASPTSGGAAY
DEELLSLLKALRKKIAKEKNLPPYVIFQDPSMEEMATTYPTTREEMAQINGVGMGKVQKF
GKPFIELIAKYVEENEIETDKDVVVKSTVNKSKVKIFIIQQIDRKVDLDEIAESKSLSME
DLMEEIEHICYSGTRLNLDYYINQVMDEDRQDEIYEYFMRAETDNIAVAMREFGGDDFTE
QDLRLMRIKFLSEVAN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggttgatcagacggtctatgagaccctcaaagaacggcttaaagagattttt
ggattcagtcagtttcggggtgatcaggaggccattattcacagtattctatcgggccgc
aacacgtttgtgattatgcccacaggtgctggtaaatcgctttgttatcagttacctgct
attgtcaacgacggtacggccatcgtgatttcgcccctgattgcgctgatgaaaaatcag
gtagatcagctcaatgcgtttggcatcaatgctcagtttctgaattcaaccctgtctaag
accgaaatgaataaggtcaaaaaagacacgctgaacggttcgctgaaactgctgtatatc
gcccccgaatcgctgactaaagaagaaaatttagactttttaaagaaagccaatatttca
ttcgtagctatcgacgaagcccactgtatctcagaatgggggcacgatttcagacctgag
tatcgaaaaattcggggtattgtcgataacatcggcaacctgccggttattgccctcacg
gccacagctacgcccaaagtgcagttggatattcagaaaaacctgcaaatggaggaggcc
aatctgtacaagacctcgttcaaccgcaaaaatctgtactacgaaataaagccgaaggtc
gacgccaaaaagcagttgatcaaatacatcaagcagaacaaaggcaagtcggggattgtg
tattgcctgagccgcaaaacagtcgaagaaattgccgaactgctgcgcgtcaacgacgtt
cgggcactgccctaccatgccgggcttgacccacaaacgcgcatggcaaatcaggacgct
ttcctcaatgaagatgccgacgttatctgcgctaccattgcgttcggcatgggtatcgac
aaacccgacgtccggttcgtgatacactacgacgcgcccaaatcgctcgagggctactat
caggaaacaggccgcgccggtcgcgacgggctggagggcaactgcattatgttctacagt
tacgacgacattgttaagttggagaaattcaacaaagacaaacccgtaacggaacgcgac
aatgccaggcacctgctaaccgaaatggtttcttacgcgaacctcggcacgtgtcgccga
cggcaattgctgggctatttcggcgaatatttagataaagactgcggtttttgtgacaat
tgcctgaaaccgaccgaaaaaataaaagtacagcaggaggtagtgctggcactgcggacg
gtgctccaaaccgatcagcggttcgacgtggcgcacctcgccgatgtgttgacggcaacc
ggcaatcagtacgtaacgagctacgaacacgaccggctcgacgtgtatggcaagggaaaa
gagtttaacgaagactgcggctggtggtgttcgctcataaaacagatcgcaattctcggc
tatcttgaaaaagacgtcgataactatggcgtactgaagctgacgcagaagggtctgaac
tatatcgaagacccgtaccctgtcacgctcgccaaagaccacgactacgatcagcaggtg
gccgaccaaaccaccgacgatgacaaagatgcgtcgccgacgtcgggcggagccgcttac
gatgaggagctgcttagcctgctgaaagcgttgcgcaagaaaattgccaaagaaaagaac
ctgccgccttacgtcattttccaggacccatctatggaagagatggcgacgacgtacccc
actacgcgcgaagaaatggcgcagatcaacggggtaggtatgggcaaggtgcagaaattt
ggtaagcccttcatcgagctgattgccaagtacgttgaagaaaatgagatcgaaaccgat
aaagacgtcgtcgttaaatcgacggtcaacaaatcgaaagttaaaatcttcattattcag
caaatcgaccgtaaagttgatttagatgagattgccgagtcgaaatcgttatcaatggaa
gacctgatggaagaaatcgagcacatctgctactctggtacgcggctaaatctcgattac
tacatcaatcaggtgatggacgaagaccggcaggacgaaatctatgaatacttcatgcgg
gccgaaaccgacaacattgccgttgccatgcgcgaattcggtggcgacgatttcaccgaa
caggacctgcgcctgatgcgtatcaaattcctctcggaagtagcaaactga
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