Spiroplasma monobiae: SMONO_v1c00940
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Entry
SMONO_v1c00940 CDS
T06543
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smoo
Spiroplasma monobiae
Pathway
smoo03420
Nucleotide excision repair
smoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMONO_v1c00940 (pcrA)
03430 Mismatch repair
SMONO_v1c00940 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smoo03400
]
SMONO_v1c00940 (pcrA)
Enzymes [BR:
smoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMONO_v1c00940 (pcrA)
DNA repair and recombination proteins [BR:
smoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMONO_v1c00940 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SMONO_v1c00940 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
PcrA_UvrD_tudor
ResIII
Motif
Other DBs
NCBI-ProteinID:
AUM62347
UniProt:
A0A2K9LTJ1
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All DBs
Position
98463..100634
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AA seq
723 aa
AA seq
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MIENLLKDLNDEQLDSVITTDVPLRIIAGAGSGKTRVITTKVAYLIEKEKIFPSKILAVT
FTNKAAQEMRDRVKKIIPNLDRNPMITTFHSFCVRVLREDCEYIGLSKDFTIIDGADQGK
IIRDIIKNLDITSDKTKPEKKILSKISNWKSKQLTWEEAYEETFNIAEKKWAKAYRDYEQ
YLAEKNYLDFDDLILKVHKLFNENIDVREKWKNRFEYILVDEFQDTNYTQFDLIKWLTGS
RNNLTVVGDPDQTIYSWRGAKVNIILNFKDEFKNSRTIMLTENYRSTKPILDIANDFIDN
NKNREKKDIFTQKKEGEIVRVKEVASRNFEAKFVSKKIKELIEEQNYKYSDIYVLYRTNA
WSQEFEKEFQNQKIPFHLIGGFKFRDRKVIKDVTSLLRVVVFKDDLAMDRIFGFTPKVGA
VTASKLKQAAFEFDLNLFDFLTQHQQEVNSISKNLNELINCLIKARKLFEENRSLLELTT
MLVKESGYKDRLDLKDKEDIESLQNLEAYYDQMEKYDISYNEGENELNRAVSFLQEEALS
SDEDNEVEINKVTLLTIHSAKGLENKVVFIVGLNKDVFPSKMSFYSIESLEEERRAFYVA
ITRAQEMLFVSYVSGEYSYISSGELGPSRFIQELNPDLYEIEKSIYFHSNTETSSGYKGK
PSLESKPSKLEAGVVKGDRINHMVFGIGTVVKVIDKYISVAFVDPKQGVKMIPINSSSWE
KME
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaaatttactaaaagatttgaatgacgaacaactcgattcagttatcacaaca
gatgttccattaagaataattgctggagctggtagtggtaaaacaagagttataacaaca
aaagttgcgtacttaattgaaaaagaaaaaatatttccatcaaaaattctcgcagtaact
tttacaaacaaggctgctcaagaaatgagagatagagtaaaaaaaataattcccaattta
gatagaaatccaatgattacaacatttcactctttttgtgtaagggttttaagagaagat
tgtgaatacattggcctttctaaagattttacaataattgacggagctgaccaaggtaaa
atcattagagatataataaaaaatttggatattacatccgataaaactaaaccagaaaaa
aagattctttctaaaataagtaattgaaaatctaaacaattaacatgagaagaagcttat
gaagaaacttttaatattgctgaaaaaaaatgagcaaaagcttatagagactatgaacaa
tatttagcagagaaaaattatttagattttgatgatttaattctaaaagttcataaatta
tttaatgagaatattgatgttagagaaaaatgaaaaaatagatttgagtatatattagtt
gacgagtttcaagacacaaactatacacaatttgatctaataaaatgacttactggttct
agaaataatttaactgttgttggagatcccgatcaaaccatttattcttgaagaggagct
aaagtaaatattattttaaactttaaagatgaatttaaaaactcaagaactattatgtta
actgaaaattatagatcaacaaagcctattttggatattgcaaatgattttattgataat
aataaaaatagagaaaaaaaagatatattcactcaaaaaaaggaaggagaaatagtgagg
gttaaagaagttgcttcaagaaattttgaagccaagtttgtttctaaaaaaattaaagaa
ctaatagaagaacaaaattataaatactctgatatttatgttttgtatagaacaaatgct
tgatctcaagagttcgaaaaagagtttcaaaatcaaaagataccattccatttaattggt
ggttttaaatttagagatagaaaagtgattaaggacgtaacctcactactaagagttgtg
gtttttaaagatgatttggcaatggatagaatatttggtttcactccaaaagttggtgct
gtaactgcctcaaaactaaaacaagcagcttttgaatttgatttaaatttattcgatttc
ctaactcaacaccaacaagaagttaattcaatatctaaaaacttaaatgaactaataaat
tgtttaataaaagctagaaaattatttgaagaaaacagaagtcttttagagttgacaaca
atgttggttaaagagtctggctataaagatagattagatttaaaggataaagaagatata
gaatctttacaaaacttagaagcatattacgatcaaatggagaaatatgacatttcatac
aacgagggtgaaaatgaattaaatagagctgtaagttttttacaagaagaagcgctttct
agcgatgaagataatgaagttgaaattaacaaagttacattgcttacaatccactctgca
aaaggattggaaaataaagttgtatttattgttgggttaaacaaggatgtatttccttct
aaaatgagtttttactcaatcgaaagtttagaagaagaaagaagagctttctacgttgct
ataaccagagcacaagaaatgttatttgtttcttatgtttctggtgagtattcatatatt
tctagtggtgaattaggaccttctagatttattcaagaattaaatcctgatttatatgaa
attgaaaaaagtatctatttccactctaatacagaaacttcaagtggatataaaggaaaa
cccagtttagaatcaaaaccatcaaaactagaagctggagtggttaagggagaccgaatt
aatcatatggtgtttggcataggaactgttgtaaaagttatagataaatatatatctgta
gcatttgtagatccaaaacaaggggttaaaatgattcctattaacagctcttcgtgagaa
aaaatggaataa
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