Spiroplasma monobiae: SMONO_v1c05460
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Entry
SMONO_v1c05460 CDS
T06543
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
smoo
Spiroplasma monobiae
Brite
KEGG Orthology (KO) [BR:
smoo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SMONO_v1c05460 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smoo03021
]
SMONO_v1c05460 (rpoD)
Transcription machinery [BR:
smoo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMONO_v1c05460 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AUM62795
UniProt:
A0A2K9LWM2
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All DBs
Position
complement(602526..603920)
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AA seq
464 aa
AA seq
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MALNLKKFETMEEFKEYLWNYLDKNDNEIAQEEIQEVIFKKFQDIDEEEINILFDELAKR
EVNFTDDFIEDEDEDEDEDEENDDDADELEGEFRKRDKERKDLKKANENNTPVKYRVGGI
SNETKIQDIIKSYFNQIGSSKILTKDEEVEYAKMLEDSDPEIAKEGRDKLITSNLKLVIS
VARKHLNRGLDFADLIEEGNIGLMKAVDKFDYKKGFKFSTYATWWIRQAITRAIADQART
IRIPVHMVETINKLTRIERQLTQELGREPTSKEIAKTFGKGITPQKVIEIKKLSIEPVSL
EKPFGDEDDTHFGDFVEDKDISSPDEYAEKEALREVIDEVFSDILAPREEKVVRMRFGIL
PTKLRTLVRLAQECDDDSYEELKQAVADLDIHYDTSIEKIQKYKNPMIQLHLSKYDSPKT
LEEVGKELKVTRERIRQIEAKTIRKFKPSASNPKAKALRDFFKG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaatttaaaaaaatttgaaacaatggaagaattcaaagaatacctttgaaat
tatttagataaaaacgataacgaaatagctcaagaagaaattcaagaagttattttcaag
aaattccaagatattgatgaggaagaaattaacatactatttgatgaacttgcaaaaaga
gaagttaactttactgatgactttatcgaagatgaagatgaagacgaagatgaagatgaa
gaaaacgatgatgatgctgatgaacttgaaggtgaattcagaaaaagagataaagaaaga
aaagatttaaaaaaagctaacgaaaacaacacaccagttaaatatagagttggtggaatt
agtaatgaaacaaaaattcaagatattattaaatcttactttaaccaaattggttcatca
aaaatcttaactaaagatgaagaagttgaatatgcaaaaatgttagaagattcagatcca
gaaattgcaaaagaaggtagagataaattaattacttctaacttaaaacttgttatttct
gttgctagaaagcatttaaacaggggattggattttgcagatttaattgaagaaggaaac
attggtttaatgaaagctgttgataaatttgattacaaaaaaggatttaaattttcaact
tatgctacatgatgaattcgccaagctataacaagagctattgctgaccaagcaagaaca
attcgtattccggttcatatggttgaaacaattaacaaacttacaagaattgaaagacaa
ttaactcaagagttgggtagagaacctacttcaaaagaaattgcaaaaacttttggaaaa
ggaattactccacaaaaagttattgaaatcaaaaaattgtcaattgaaccagttagttta
gaaaaaccatttggtgatgaagatgatactcatttcggagattttgttgaagataaagat
atttcatctccagatgaatatgctgaaaaagaggctttaagagaagttatcgatgaagtt
ttctctgacatacttgctccaagagaagaaaaagttgttagaatgagatttggtatctta
ccaactaaactaagaactttagtaagacttgcacaagagtgtgatgatgatagttatgaa
gaattaaaacaagcagttgctgatttagatattcactatgatacatcaattgaaaaaatt
caaaaatataaaaaccctatgattcaattacatctttctaaatatgattcaccaaaaact
ttagaagaagttggtaaagaattaaaagttacaagagaaagaattagacaaattgaggct
aagacaattagaaaattcaagccatctgcatcaaatcctaaagcaaaagctttaagagat
ttctttaaaggttaa
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