Spiroplasma monobiae: SMONO_v1c07230
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Entry
SMONO_v1c07230 CDS
T06543
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smoo
Spiroplasma monobiae
Pathway
smoo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smoo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMONO_v1c07230 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smoo03021
]
SMONO_v1c07230 (rpoA)
03400 DNA repair and recombination proteins [BR:
smoo03400
]
SMONO_v1c07230 (rpoA)
Enzymes [BR:
smoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMONO_v1c07230 (rpoA)
Transcription machinery [BR:
smoo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SMONO_v1c07230 (rpoA)
DNA repair and recombination proteins [BR:
smoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SMONO_v1c07230 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Ribosomal_TL5_C
Motif
Other DBs
NCBI-ProteinID:
AUM62972
UniProt:
A0A2K9LVA4
LinkDB
All DBs
Position
complement(801304..802257)
Genome browser
AA seq
317 aa
AA seq
DB search
MKQFSRPEFNLLKEEKNRSYGEFKVEPLERGFGTTLGNAIRRTLLSSTPGAAVYAIKIVG
AAHEFTSINGIVENVSRIILNLKSLALRIDSKIFEDDEVVELKINSTRAGAITAADIVLP
TGVEVMNPELHICTISDGGVLDLTLFAKNSRGYRSFKDNKKEKLVADAITIDSNYSPIVK
VAYNVDATKIGKSVDLEKLILEVETDGTVTASDAVATAAKILVEHLQFFVNLNEEINDLN
VIGATNEEDEKELDRLIEDLDFTQRSLNCLKRANINSLRDLVSRTEDDIQEIRNLGRKSL
KEIKDKVVQLGLTFKQD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattttcaagaccagaatttaatttattaaaagaagaaaaaaacagaagttat
ggggaatttaaagttgaaccacttgaaagaggatttggtacaacacttggtaatgctatc
agaagaacattactatcatcaacaccaggagcagcagtttatgcaattaaaattgtagga
gcagcacatgaatttacttcaataaatggtattgttgaaaatgtaagtagaataatttta
aacttaaaaagtttagctctaagaatcgattcaaaaattttcgaagatgacgaagtggtt
gaattaaaaattaattcaacaagagctggagcaattactgcagcagacatcgttttacct
acaggagttgaagttatgaatccagaattacacatttgtacaatatcagatggtggagtt
ttagatttaactttatttgcaaaaaactcaagaggttatagatcattcaaagataacaaa
aaagaaaaattagttgcagatgcaattacaattgattcaaattattctccaatcgttaaa
gttgcttacaatgtagatgcaactaaaattggaaaatcagtagacttagaaaaattaatt
ttagaagttgaaactgatggaacagtaacagctagtgatgcagtagcaacagctgcaaaa
atcttagttgagcacttacaattctttgtaaacttaaacgaagaaattaatgacttaaat
gttattggtgcaacaaacgaagaagacgaaaaagaattagatcgtttaatcgaagattta
gatttcacacaaagaagtttaaattgtctaaaaagagcaaacatcaattcattacgcgac
ttagtatcacgcacagaagatgatattcaagaaattagaaacttgggtagaaaatcatta
aaagaaattaaagataaagttgttcaattaggactaactttcaaacaagattag
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