Sphingomonas morindae: LHA26_03900
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Entry
LHA26_03900 CDS
T08557
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
smor
Sphingomonas morindae
Pathway
smor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LHA26_03900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smor03400
]
LHA26_03900
Enzymes [BR:
smor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LHA26_03900
DNA repair and recombination proteins [BR:
smor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LHA26_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_22
PIF1
HypA
Motif
Other DBs
NCBI-ProteinID:
USI73626
UniProt:
A0ABY4XA55
LinkDB
All DBs
Position
1:796552..798720
Genome browser
AA seq
722 aa
AA seq
DB search
MSRARVLLLNAALGPLDYRVPREMHVAPGSIVLAPLGPRQLAGVVWEADRMPSDAEVGDN
RLRNLVAPYDLPPIAAPLRRLIEWTADYYLAPPAAVLRMALASASALDGGRTAIEYRATG
RVPERLTPQRAQALERIGERQGLVRELAAIADVSDGVIRGLVKLGAIEAVKVAVDDPFLP
PDPDHAPPALSADQRAAAEAMSAAVTAAAFQPFLLDGVTGSGKTETYFEAIATALRHDRQ
ALVLLPEIALTEPFLKRFEARFGHLPVAWHSDLRSTQRRRAWRAIASGEARVVVGARSAL
FLPYARLGLIVVDEAHETSFKQEEGVMYHARDVAVMRARFEDVPVILASATPAIETRQMV
EIGKYRELKLASRYGAAQMPTIETIDMTRDPPPRGRWLAPSLVAALTDTVARGEQALLFL
NRRGYAPLTLCRNCGHRFRCPNCTAWMVEHRLTARLACHHCGHVMPPPAACPECHEEDVL
VACGPGVERIADEVAALLPEARVAIVTSDTLWSPAKAAEFVARMEAGAIDVVVGTQLVTK
GYHFPNLTLVGVVDADLGLQGGDLRAAERSFQQIAQVAGRAGRGEKPGRVLVQTREPGAP
VIEALVTGDAESFYQAETESRREAGAPPFGRYAAIIVSSEDQGEALLAAQTIGRAAPEID
GMMVFGPAPAPLAMLRGRHRQRLLVHARRALDVQTVIRDWLGALSWPRGVRVAVDVDPYS
FL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgcgcgtgctgctgctcaacgcggcgctcggcccgctcgattatcgcgtc
ccgcgcgagatgcatgtcgcgccgggctcgatcgtcctcgccccgctcggcccgcgccag
ctcgccggcgtggtgtgggaggcggaccgcatgccctcggacgcggaagtgggggataac
cgcctgcgcaacctcgtggccccctatgatctgccgccgatcgccgcgccgctgcgtcgg
ctgatcgagtggaccgccgactattatctggcgccgcctgccgccgtgctgcgcatggcg
ctcgcctcggccagcgcgctggatggcggccgcaccgcgatcgaatatcgcgccaccggc
cgcgtgcccgagcggctcaccccccagcgcgcccaggcgctggagcggatcggcgagcgc
cagggtctggtccgcgaactcgccgccatcgccgacgtgtcggacggcgtgatccgcggg
ctggtgaagctcggcgcgatcgaggcggtgaaggtggcggtggacgatcccttcctgccg
cccgatcccgatcatgcgccgcctgcgctctcggccgatcagcgcgccgcggccgaggcg
atgagcgcggcggtgaccgccgccgccttccagccctttctgctcgacggcgtcaccgga
tcgggcaagaccgaaacctatttcgaggcgatcgccactgcgctgcggcacgatcgccag
gcgctggtgctgctccccgaaatcgcgctgaccgagcctttcctcaagcggttcgaggcc
cggttcgggcatttgcccgtggcctggcattccgatctgcgctccacccagcggcgccgc
gcctggcgggcgatcgcgagcggcgaggcccgggtggtggtgggcgcgcgctcggcgctg
ttcctgccctatgcccggctcgggctgatcgtggtcgacgaggcgcacgagaccagcttc
aagcaggaagaaggcgtgatgtaccacgcccgcgacgtggcggtgatgcgcgcccgcttc
gaggatgtgcccgtgatcctcgcctcggccacccccgccatcgagacccggcagatggtg
gagatcggcaaatatcgcgagctgaagctcgccagccgctatggcgccgcgcaaatgccg
acgatcgagacgatcgacatgacgcgcgatccgccgccgcgcgggcgctggctcgcgcct
tcgctggtggcggcgctgaccgatacggtggcgcggggcgaacaggcgctgctcttcctc
aaccggcggggctatgcgccgctcaccctctgccgcaattgcggccatcgcttccgctgc
cccaattgcaccgcctggatggtggagcaccgcctcaccgcgcggctcgcctgccaccat
tgcggccatgtcatgccgccgcccgccgcctgcccggaatgccatgaggaggatgtgctg
gtcgcctgcgggcccggcgtggagcggatcgccgacgaggtggcggcgctcctgcccgaa
gcgcgggtggcgatcgtcacctccgacacgctctggtcgcccgccaaggcggccgagttc
gtggcgcgaatggaggcgggcgcgatcgacgtggtggtgggcacgcagctcgtcaccaaa
ggctaccacttccccaatctcacgctggtgggcgtggtggatgccgatctcgggctgcag
ggcggcgatcttcgcgccgccgagcgcagtttccagcagatcgcgcaggtggcggggcgc
gcggggcgcggcgagaagcccggccgcgtgctggtccagacgcgcgagcccggcgcgccg
gtgatcgaggccctggtgacgggcgatgccgaaagcttctaccaggccgaaaccgagagc
cggcgcgaggccggggcgcccccctttggccgctatgcggcgatcatcgtctcgtccgag
gatcagggcgaggcgctgctcgccgcgcagacgatcggccgcgccgcgcccgagatcgat
ggcatgatggtgttcggtcccgcccccgcgccgctcgccatgctgcgcgggcgccaccgc
cagcggctgctcgtccatgcgcggcgcgcgctcgacgtgcagaccgtgatccgcgattgg
ctgggcgcgctcagctggccgcgcggcgtgcgcgtggcggtggatgtggatccgtacagc
tttctctga
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