Sphingomonas morindae: LHA26_03945
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Entry
LHA26_03945 CDS
T08557
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
smor
Sphingomonas morindae
Pathway
smor00470
D-Amino acid metabolism
smor00550
Peptidoglycan biosynthesis
smor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LHA26_03945 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LHA26_03945 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smor01011
]
LHA26_03945 (murD)
Enzymes [BR:
smor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LHA26_03945 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
smor01011
]
Precursor biosynthesis
Amino acid ligase
LHA26_03945 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
USI73634
LinkDB
All DBs
Position
1:complement(808245..809621)
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AA seq
458 aa
AA seq
DB search
MIRSPAFAGRHYAVLGLARSGLASVAALLAGGARVTAWDADAARRAAPELADAPGLTLAD
PMTLPLDGMDGIVVSPGVPLNTHPIAARAAAAGVPVIGDIELFALARPTLPPHRVVGITG
TNGKSTTTALVHHILEGAGVPTLMGGNIGLPILGQTPLPAGGVYVLELSSFQIDLTHSLA
CDVAALTNITPDHLDRYADFAAYAAAKRRLFQLQGGGQVAVIATDDDETRAIAALLADPA
DPAPGDAALFGAQAALPAPAERPLLVTVSAADIADQSRWPALQGPHNAQNVAVACAIAEA
LGIDPAAIEAGLRSYPGLPHRMERVATINGVLWVNDSKATNATSTAPALGAYQRIHWIAG
GRRKTDELDACRPFLGHVAAAYTIGEATELFAALLGTAGVAVTRAGTLDAAVAAAAAAAR
PGDVVLLSPACASYDQFSDYEARGRAFVQAVRAMEARP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctcgcccgcctttgccggccgccattatgcggtgctggggctcgcccgctcg
ggcctggcgagcgtcgccgcgctgctcgccgggggcgcgcgcgtcacggcgtgggacgca
gacgccgcgcgccgcgccgcgcccgaactggcggacgcgcccggcctcacgctcgccgat
cccatgacgctgccgctcgacgggatggacgggatcgtggtgtcgcccggcgtgccgctc
aacacccacccgatcgccgcgcgcgcggcggcggcgggggtgccggtgatcggcgatatc
gagctgttcgccctggcgcgcccgacgctgccgccgcaccgcgtggtgggcatcaccggc
accaacggcaagtccaccaccaccgcgctggtccaccacattctcgagggcgccggggtg
ccgacgctgatgggcggcaatatcggcctgcccattctgggccagacgccgctgccggcc
ggcggggtctatgtgctcgagctgtcgagcttccagatcgatctcacccacagtctcgcc
tgcgatgtcgcggcgctgaccaacatcacccccgatcatctcgatcgctatgccgatttc
gccgcctatgcggccgccaagcggcggctcttccagctgcagggcggcgggcaggtggcg
gtgatcgccaccgacgatgacgagacccgcgcgatcgccgcgctgctggcggacccggcc
gatccggcgccgggcgacgccgcgctgttcggcgcgcaggcggcgctgcccgcgccggcg
gagcggccgctgctggtgaccgtatcggccgccgatattgccgaccagagccgctggccc
gcgctgcaggggccgcacaatgcgcagaatgtcgcggtggcgtgcgccatcgcggaggcg
ctcggcatcgaccccgcggcgatcgaggcggggctgcgctcctatcccgggctgccgcac
cgcatggagcgggtggcgacgatcaacggggtgctgtgggtgaacgacagcaaggccacc
aacgccacctccacggcgcccgcgctgggcgcctatcagcgcatccactggatcgcgggc
ggtcgccgcaagaccgacgagcttgatgcctgccgcccctttctcggccatgtcgccgcc
gcctacacgatcggcgaggcgaccgagctgttcgcggcgctgctcggcacggcgggcgtg
gcggtgacgcgcgccggtacgctggacgcggcggtggcggcggcggcggcggcggcgcgg
ccgggcgatgtggtgctgctgtcgccggcctgcgcctcctatgaccagttcagcgactat
gaggcgcgcggccgcgcctttgtccaggcggtgcgggcgatggaggcgaggccatga
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