Sphingomonas morindae: LHA26_04115
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Entry
LHA26_04115 CDS
T08557
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
smor
Sphingomonas morindae
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smor03019
]
LHA26_04115 (rnc)
03009 Ribosome biogenesis [BR:
smor03009
]
LHA26_04115 (rnc)
03036 Chromosome and associated proteins [BR:
smor03036
]
LHA26_04115 (rnc)
Enzymes [BR:
smor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LHA26_04115 (rnc)
Messenger RNA biogenesis [BR:
smor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LHA26_04115 (rnc)
Ribosome biogenesis [BR:
smor03009
]
Eukaryotic type
90S particles
RNase
LHA26_04115 (rnc)
Prokaryotic type
rRNA processing factors
LHA26_04115 (rnc)
Chromosome and associated proteins [BR:
smor03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LHA26_04115 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
USI73666
LinkDB
All DBs
Position
1:845619..846287
Genome browser
AA seq
222 aa
AA seq
DB search
MSDTGLAAWLETALGQAPQRLDRFETALTHSSHAGESYQRLEFLGDRVLGLVMAEWLFTL
FPDEPEGKLSRRLNALVAGDTCAEIAREIGVAAHLRLGKQARDDGATHSVYVLGDVIEAL
IGALFLEAGFEGARAAIRRLWGDRVQHQDKAPKHPKAELQELAAARQWRPPVYTLGHRSG
PHHAPTFTVRVEIAGRAGAEGRGSSKQEAETAAARALLEQVK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccggcctcgccgcctggctcgaaaccgcgctgggccaggcgccgcagcgg
ctcgaccggttcgagaccgcgctcacgcatagcagccatgcgggcgagagctatcagcgg
ctcgaattcctgggcgatcgcgtgctcgggctggtgatggccgaatggctcttcaccctc
ttccccgacgagcccgagggcaagctgtcacgccggctcaacgcgctggtggcgggcgac
acctgcgccgagatcgcgcgcgagatcggcgtggcggcgcatctgcggctcggcaagcag
gcgcgcgacgatggcgcgacgcattcggtctatgtgctgggcgacgtgatcgaggcgctg
atcggcgcgctcttcctcgaggcggggttcgaaggcgcgcgcgccgccatccgccggctc
tggggcgatcgcgtccagcatcaggacaaggcgcccaaacatcccaaggccgagctgcag
gagctggccgccgcgcgccagtggcggccgccggtctatacgctgggccatcggtccggc
ccgcatcatgcgcccaccttcaccgtgcgggtggagattgccggccgcgccggcgccgag
gggcgcggatcgtccaagcaggaggccgagacggcggcggcgcgcgcgctattggagcaa
gtgaaatga
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