Sphingomonas morindae: LHA26_06855
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Entry
LHA26_06855 CDS
T08557
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smor
Sphingomonas morindae
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smor03016
]
LHA26_06855
Enzymes [BR:
smor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LHA26_06855
Transfer RNA biogenesis [BR:
smor03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LHA26_06855
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
USI74165
LinkDB
All DBs
Position
1:1411983..1412600
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AA seq
205 aa
AA seq
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MTVYFHEEDLPEDALAPGAVAVDTETMGLITPRDRLCVVQIADGRGDEHLVRFGPGSRFE
APRLKAVLADPERTKLYHFARFDLAAIRHYLGVVAAPVYCTKIASRLTRTYTDRHGLKEL
VRELLGIEISKQQQSSDWGATTLSDAQKDYAASDVRYLHQLRERFDERLVREGRMALAQA
CFDFLPARAELDLAGWPEIDIFAHA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctattttcatgaagaggatctgcccgaggacgcgctcgcgcccggggcggtg
gccgtggacaccgagacgatggggctcatcaccccgcgcgatcggctttgcgtggtgcag
atcgccgatggccggggggatgagcatctcgtccgcttcgggcccggcagccgcttcgag
gcgccgcggctcaaggccgtgctcgccgatccggagcgcaccaagctctaccatttcgcc
cgcttcgatctcgcggcgatccgccattatctcggcgtggtggcggcacccgtctattgc
accaagatcgcctcgcgcctcacccgcacctataccgatcgccacggcctgaaggagctg
gtgcgcgagctcctcggcatcgagatctccaagcagcagcaatcctccgattggggcgcc
accacgctgagcgacgcccagaaggattatgccgcgtccgacgtgcgctatctccaccag
ctgcgcgagcggttcgacgagcggctggtgcgcgagggccggatggcgctggcgcaggcc
tgtttcgatttcctgcccgcgcgcgccgagcttgatctcgccggctggcccgagatcgac
attttcgcccatgcctga
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