Sphingomonas morindae: LHA26_07145
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Entry
LHA26_07145 CDS
T08557
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smor
Sphingomonas morindae
Pathway
smor03030
DNA replication
smor03410
Base excision repair
smor03420
Nucleotide excision repair
smor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHA26_07145 (polA)
03410 Base excision repair
LHA26_07145 (polA)
03420 Nucleotide excision repair
LHA26_07145 (polA)
03440 Homologous recombination
LHA26_07145 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smor03032
]
LHA26_07145 (polA)
03400 DNA repair and recombination proteins [BR:
smor03400
]
LHA26_07145 (polA)
Enzymes [BR:
smor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHA26_07145 (polA)
DNA replication proteins [BR:
smor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LHA26_07145 (polA)
DNA repair and recombination proteins [BR:
smor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LHA26_07145 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LHA26_07145 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
DNA_polI_exo1
HHH_2
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
USI74221
LinkDB
All DBs
Position
1:complement(1471888..1474641)
Genome browser
AA seq
917 aa
AA seq
DB search
MPASHLYLVDGSSYIFRAYHRLPPLTNRHGQPAGAVYGFTTMLWKLLNELAGPEGPSHLA
VIFDKGSHSFRNEMYDQYKAHRPPPPEDLVPQFPMIRDATRAFSVPCIEVAGFEADDIIA
CYAKAALAEGWAVTIVSSDKDLMQLIEPGLDMLDTMNDRRIGPDYVVEKFGVGPDKLGDV
LALMGDSVDNVPGVPGVGPKTASQLIQTYGDLESVLAAAESITKPKLRQALIEHADTARL
SRRLVELHCAAPLPEPLDGLSLQGIPPAPLRAFLEDQGFRSLLTKLGDGGAAPVPAAAAA
ALPDDPPFRHEAYETVVEIEALDRWIAAATAQGHVAIDTETDHLDAMRANLVGVSLALVP
GQACYIPIGHVGEGEGLLAEVPVQLPRALVLARLAPLLADPAVLKIGQNLKFDMLVLARA
GLDLVGYDDTMLISYDLDAGRQSHGMDDLCKTHLAHTTIAFKDVCGSGKNQVSFDRVGLE
RATHYAAEDADVTLRLWRRLKPRLAAEGATRVYELVDRPLVPVVAAMERAGVRVDRDELQ
RLSADYAVEIARLEGVIHEAAGGPFTIGSPKQLGEVLFERLGLKGGRKGKSGVYSTDVNE
LERLAGDGVEVARLVLEWRQLTKLKTTYTDALQQQINPETGRVHTSFSLAVAQTGRLSST
DPNLQNIPIRTELGRRIRDAFVAAPGHVILSADYSQIELRLAAHMADVPELREAFATGAD
IHSLTAQELFGEVTRETRGRAKTINFAILYGISAFGLAGRLGVDRGEAQAIIDRYFARFP
GVSRYIADTVAQVRAQGHVTTLFGRKTWLPGIKGKTVGERQGAERQAINAPIQGTSADLI
KRAMVRMGPALAAAGLDRVRMLLQVHDELVFEVPEEEAARAAEVIRAVMEAAAGPAVTLS
VPLGVEIGTGPSWGAAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccagccatctctatctcgtcgacggatcgagctatatcttccgcgcctatcac
cggctgccgccgctgaccaatcggcacggacagcccgccggcgccgtctatggcttcacc
accatgttgtggaagctgctgaacgagctggccggtccggaggggccgagccatctggcc
gtgatcttcgacaagggcagccacagcttccgcaacgagatgtacgatcagtacaaggcg
caccgcccgccgccgcccgaggatctcgtcccgcaattcccgatgatccgcgatgcgacg
cgcgccttttcggtgccgtgcatcgaagtggccggcttcgaggcggacgatatcatcgcc
tgctacgccaaggcggcgctggccgagggctgggccgtcaccatcgtctcgtccgacaag
gatctgatgcagctgatcgagcccgggctcgacatgctggacacgatgaatgatcgccgg
atcgggccggactatgtcgtcgagaagttcggcgtcggaccggacaagctcggcgatgtg
ctggcgctgatgggcgacagcgtcgacaatgtgcccggcgtgcccggcgtcgggccgaaa
acggcgagccagctgatccagacctatggcgatctcgaatcggtgctggcggccgccgag
tcgatcaccaagcccaagctgcgccaggcgctgatcgagcacgccgatacggcgcggctc
tcgcgccggctggtggagctgcactgcgccgcgccgctgcccgaaccgctcgacgggctc
tcgctccagggcattccgccggcgccgctgcgcgcctttctggaggatcagggcttccgc
tcgctgctcaccaagctcggcgatggcggcgcggcgcccgtgccggccgctgcggcggcg
gcgctgcccgatgatccgcccttccgccacgaggcctatgagacggtggtggagatcgag
gcgctcgaccgctggatcgcggcggccaccgcgcagggccatgtcgcgatcgataccgag
accgatcatctcgatgcgatgcgggccaatctggtcggcgtcagcctcgccctggtgccc
ggccaggcctgctatatcccgatcggccatgtcggcgagggcgagggcctgctcgccgag
gtgccggtgcagctgccccgcgcgctggtgctggcgcggctggcgccgctgctcgccgat
cccgccgtgctcaagatcgggcagaatctgaagttcgacatgctggtgctggcgcgcgcc
gggctcgatctggtcggctatgacgatacgatgctgatcagctacgatctcgatgccggc
cgccagagccatggcatggacgatctgtgcaagacgcatctcgcccacaccaccatcgcc
ttcaaggatgtctgcggctcgggcaagaatcaggtcagcttcgatcgggtcgggcttgag
cgcgccacccattatgccgccgaggacgccgatgtgacgctgcggctgtggcgccggctc
aagccgcgtctcgccgccgagggcgcgacccgcgtctatgagctggtcgatcggccgctg
gtgcccgtcgtcgcggcgatggagcgcgctggcgtccgggtggatcgcgacgaattgcag
cggctctcggccgattacgcggtcgagatcgcgcggctggagggcgtgatccacgaagcc
gcgggcggccccttcaccatcggctcgcccaagcagctcggcgaggtgctgttcgagcgg
ctcggactcaagggcggccgcaagggcaagtcgggcgtctattccaccgatgtgaacgag
ctggaacggctggcgggcgatggcgtggaggtggcgcggctggtgctggaatggcgccag
ctcaccaagctcaagaccacctataccgatgccctgcagcagcagatcaatcccgagacg
ggccgggtccataccagcttcagcctcgccgtggcgcagacggggcggctgtcctccacc
gatcccaatctccagaacatccccatccgcaccgagttggggcgccgcatccgcgatgcc
tttgtcgccgcgccgggccatgtcatcctctcggcggactattcgcagatcgagctgcgc
ctcgccgcgcacatggccgatgtgcccgagctgcgcgaggccttcgccaccggcgcggac
attcacagcctcaccgcgcaggaattgttcggcgaggtgacgcgggagacgcgcggccgc
gccaagacgatcaatttcgccatcctctacggcatctcggccttcgggctggccggccgg
ctgggggtggaccggggcgaggcgcaggcgatcatcgatcgctatttcgcccgcttcccc
ggggtcagccgctatatcgccgatacggtggcgcaggtccgcgcgcagggccatgtcacc
actttgttcggccgcaagacctggctgcccgggatcaagggcaagacggtgggcgagcgg
cagggcgccgagcgccaggcgatcaacgcgccgatccagggcacgtccgccgatctcatc
aagcgcgccatggtgcgcatggggcccgcgctcgccgccgccgggctcgatcgcgtccgc
atgctgctccaggtgcatgacgaactcgtgttcgaagtgccggaggaggaggccgcgcgc
gccgccgaggtgatccgcgcggtgatggaagcggcggccggcccggccgtcaccctgtcg
gtgccgctcggcgtcgagatcggcaccgggccgagctggggcgccgcgcattga
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