Sphingomonas morindae: LHA26_09130
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Entry
LHA26_09130 CDS
T08557
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
smor
Sphingomonas morindae
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smor03036
]
LHA26_09130
Chromosome and associated proteins [BR:
smor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
LHA26_09130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
MTS
ResIII
Motif
Other DBs
NCBI-ProteinID:
USI71502
UniProt:
A0ABY4X3N1
LinkDB
All DBs
Position
1:1875745..1880103
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AA seq
1452 aa
AA seq
DB search
MNAMLPVTPPVASLPLAPEPVAPAAAILSSAERLLPYLEGGERIDAVALRGAMEGAFGSS
DATGAWDWKAAYEACEVATVLFLRKYGKALFRKAASPAARLSVLAKITALLPTHTRRSEE
SRALQQFSTPLPLGLAALTAAAIAPSDRVLEPSAGTGLLAILAETAGGALILNELADTRA
DLLGSLFPALAVTRFDAAQIDDHLDAAAVPSVVLMNPPFSAMANVSGRVADAGFRHIASA
LARLADGGRLVAITGANVGSDMPDWRDAFVGLQARGRVVFTATVAGAVYTKHGTTFPTRL
TVIDKQPADNPAVFPASPGTASDAATLLGWIEANVPPRLPVTLPAASTPVTPTPRGVTAY
LRARSAAPASVRSRPSTLEIEGVELAYDTVDWTPPEEAHLTDAIYEEYGLQSIRIPGAQP
HPTKLVQSAAMASVAPPKPSYRPMLPAAVVTGGLLSDAQLETVIQAGEAHGDHLAGSWTV
DDTFDLVKAAPADATATVRFRRGYMLGDGTGCGKGRQVAGILLDNWLRGRCRAVWISKSD
KLLEDAQRDVAALGLERLLVTPLSRFPQGKPIALGEAILFTTYVTLRSDNRGEKLSRVKQ
IVEWLGSDFDGVIVFDESHAMQNAAGGTSERGDTAPSQQGRAGLRLQHALPDARVVYVSA
TGATTVHNLAYAQRLGLWGGEDFPFATRAEFVEAIEAGGVAAMEVLARDLKALGLYTARS
LSYDGVEYELVEHQLTDEQRRIYDSYAGAFAVIHNNLDAAMQAANITGSDGTLNRQAKSA
ARSAFESTKQRFFGHLLTSMKTPTLIRAIDADLAAGHAAVVQIVSTGEALMERRLAEISS
EEWNDVRVDITPREYVLDYLAHSFPVQLYEPFTDGEGNLSSRPVFRDGQPVESREAVRRR
DDLIERLAMLPPVPGALDQIVQRFGTDMVAEVTGRSRRIVRKCGGDGIDRHAVERRAPSA
NLAETAAFMDDVKRVLVFSDAGGTGRSYHAELSAKNRRLRVHYLLEPGWKADAAIQGLGR
TNRTNQAQPPLFRPIATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGAGLFRPEDNLES
AYARDALRQFYLLIVRGRIEGCSLERFETATGLKLLDGTGGIKDELPPITTFLNRLLALT
IDLQNVLFTAFERLLAAKVEGAIASGHYDQGLETLTAESFTVTDRATIYTHPGTGAETRL
LTIAERRRNRPMLLDDALALGDDGRTRLLVNERSGRAAVQVAAPSLMLDDGEIERRVRLM
RPMETYALPITALAESHWREVDRAAFAAAWKAELAEVPAFAEYTLHIVAGLLLPVWKRLP
NESTRVYRLQTDDGERIIGRRVSPAWAATAAATGAPTLTPDQAFAALIDGRTILDLTEEL
QLRRVRVMSTNRIELTGFTEAMRDRLRAYGLFTEIISWKLRFFVPVDASGPTVLARLLDT
YAIARVAEREAA
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaatgttgcccgtcaccccgccggtcgcatccctcccgctcgctcccgagccg
gtcgcgccagccgccgccatcctgtcgtccgccgagcgtctgctgccgtatctcgaaggc
ggcgagcggatcgatgccgttgccctgcgcggcgcgatggagggcgccttcggcagctcg
gacgcgaccggcgcctgggactggaaggcggcctacgaggcctgcgaggtagccaccgtc
ctgtttctgcggaagtacggcaaggcgcttttccgaaaagccgcctctccggctgcacgt
ctgtccgtgctggcgaagatcacagcgctgctgcccacgcacacccgccggtccgaagag
agccgggcgctgcaacagttcagcacgccgctgccgctcgggctggccgcgctgaccgcc
gccgcgatcgcgccgtctgaccgcgtgctggagccgtccgccggcacgggcctcctcgcc
atcctcgccgagaccgcaggtggcgcgctgattctcaacgagctggccgatacccgcgcc
gacctgctgggctcgctgttcccagcgctcgccgtcacgcgcttcgacgcggcgcagatc
gacgatcatctcgacgccgcggcggtgccgtccgtcgtgctgatgaacccgcccttctcg
gcgatggcgaacgtctcgggccgtgttgccgacgccggcttccgccacatcgcctccgcg
ctggcgcgtctcgccgacggcggccggctggtcgcgatcaccggtgccaacgtcggttcg
gacatgcccgactggcgcgatgcgttcgtcggccttcaggcgcgtggtcgcgtcgtgttc
accgcgacggtcgccggcgcggtctataccaagcacggcacgaccttcccgacgcggctc
accgtcatcgacaagcagccggccgacaatccggccgtgttcccggcttcgccgggcacg
gcatccgacgccgcgacgctgctcggctggatcgaggcgaacgtgccgccccggttgccg
gtcacgctgccggccgcttctacgccggtgacaccgacgccgcgcggtgtcaccgcgtac
ctgcgcgcgcgatcagccgccccggcatccgtccgctcccggccatcgacgctggagatc
gagggcgtcgagctcgcatacgacacggtagactggacgccgcccgaggaggcgcacctc
accgatgcgatctacgaagagtacggattgcagtcgatccgcattcccggcgcgcagccg
catccgaccaagctcgtccagtcggcggcgatggccagcgtcgcgccgccgaagccgtcc
taccggccgatgctgccggcggccgtcgtgacgggcggcctcctgtccgatgcgcagctc
gagaccgtcatccaggctggcgaggcccacggcgaccatctcgccggttcctggacggtg
gacgacaccttcgacctcgtgaaggcggcgcccgccgatgctacggccactgtgcgcttc
cggcgcggctacatgctcggcgacggcacggggtgcggcaagggccggcaggtcgccggt
atcctcctcgacaactggctgcgcggtcgctgcagggcggtgtggatctccaaatccgac
aagctgctggaggacgcccagcgcgacgtcgccgcactcgggctggagcggctgctggtc
acgccgctgtcgcgcttcccgcaaggcaagccgatcgcgctcggcgaagccatcctgttc
accacctatgtcacgctgcgctccgacaaccgcggggagaagctttcccgcgtcaaacag
atcgtggaatggcttgggtccgacttcgacggagtgatcgtcttcgacgagagccatgcc
atgcagaacgccgccggcggaacgagtgagcgcggcgacactgccccctcgcagcagggg
cgtgccgggttgcggctccagcatgcgctgccggacgctcgtgtcgtgtacgtctcggcg
accggcgccaccacggtccacaatctcgcctacgcgcagcggctcggcctctggggcggc
gaggattttccctttgcgacgcgcgcggagttcgtcgaggcgatcgaggccggcggcgtc
gcggcgatggaggtgttggcgcgcgacctgaaggcgctcggcctctacaccgcccgctcg
ctgtcctatgacggcgtcgagtacgagttggtcgagcaccaactcacggatgagcagcgc
cgcatctacgacagctatgccggcgccttcgcggtcatccacaacaacctcgacgccgcg
atgcaggcggcgaacatcaccggctcggacggcacgctgaaccggcaggcgaagtcggcc
gcgcgctcggcgttcgagtcgaccaagcagcgcttcttcggccatctcctcacctcgatg
aagacgccgacgctgatccgcgcgatcgacgcggacctcgccgccggtcatgccgccgtc
gtccagatcgtctcgaccggcgaggcgctgatggagcgccggctcgctgagatttcttcc
gaggaatggaacgacgtccgcgtggacatcacgccgcgtgagtacgtgctggattatctc
gcgcactcctttccggtgcagctctacgagccgttcacagatggcgagggcaacctgtct
tcgcggccggtcttccgcgatggccagccggtggagagtcgcgaggccgtgcgacgccgc
gacgacctgatcgagcgtctcgcgatgctgccgccggtgccgggcgccctcgaccagatc
gtccagcgcttcggcaccgacatggtggcggaggtgacgggccgctcgcgccgcatcgtc
aggaagtgtgggggcgacggcatcgatcgccacgccgtcgagcgccgcgccccctccgcc
aaccttgccgaaaccgctgcgttcatggacgacgtgaagcgtgtgctggtgttctccgac
gccggcggcacaggtcgttcctaccatgccgagctgtcggccaagaaccgtcggctacgc
gtccattacctgctcgagcccggctggaaggccgacgccgcgatccaggggctcggtcgc
accaaccgcaccaaccaggcgcagccgccgctcttccgcccgatcgcgaccgacgtgaag
gccgagaagcgcttcctctcgaccatcgcccgccgcctcgacacgctcggcgccatcacg
cgcgggcagcgccagaccggcggcgccggcctgttccggcccgaggacaacctcgaaagc
gcctatgcgcgcgacgcgctgcgccagttctacctgctgatcgtgcgcggccggatcgag
ggctgctcgttggagcgtttcgagacggcgaccggcctgaagcttctcgatggaaccggc
ggcatcaaggacgagctgccgccgatcaccaccttcctcaaccggctgctggcgctcacc
atcgacctccagaacgtcctgttcaccgccttcgagcggttgctggcggccaaggtcgaa
ggcgccatcgcctccggccattacgaccaggggctggagacgctgacggcggagagcttc
accgtcaccgatcgcgccacgatctacactcatcccggcaccggcgccgagacgcggctg
ctcaccatcgccgaacggcggcgcaaccggccgatgctgctggacgatgcgctggcgctg
ggtgatgacggacgcacccggctgctggtcaacgagcgctccggccgtgctgccgtgcag
gtcgccgcaccctcgctgatgctcgacgacggcgagatcgagcggcgcgttcggctgatg
cggccgatggagacctacgcgctgccgatcacggcgctggcggaaagccactggcgggag
gtcgatcgcgcggccttcgcagccgcgtggaaggccgaactcgccgaggtgccggccttc
gctgaatacacgctgcacatcgtcgccggcctgctccttccggtgtggaagcgactgccg
aacgagtcgacgcgggtctaccggctccagaccgacgatggcgagcgcatcatcggccgc
cgcgtctcgcccgcctgggcggccaccgccgccgcgaccggcgcgccgactctgacgccg
gaccaggccttcgcggcgctgatcgacgggcggacgatcctcgacctgacagaggaactg
caactccgccgcgtccgcgtcatgagcaccaaccgcatcgagctgaccggcttcaccgag
gcgatgcgcgaccgccttcgcgcctacggcctcttcaccgagatcatctcgtggaagctg
cgcttcttcgtgccggtggacgcatcggggccgaccgtcctggcacggctgctcgacacc
tacgcgatcgcgcgcgtcgccgagcgggaggcagcgtga
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