Sphingomonas morindae: LHA26_12800
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Entry
LHA26_12800 CDS
T08557
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smor
Sphingomonas morindae
Pathway
smor03420
Nucleotide excision repair
smor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LHA26_12800
03430 Mismatch repair
LHA26_12800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smor03400
]
LHA26_12800
Enzymes [BR:
smor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LHA26_12800
DNA repair and recombination proteins [BR:
smor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LHA26_12800
MMR (mismatch excision repair)
Other MMR factors
LHA26_12800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
USI72175
LinkDB
All DBs
Position
1:complement(2610423..2612714)
Genome browser
AA seq
763 aa
AA seq
DB search
MSSSPAPAPAAEPGYLQGLNPAQRDAVLTSDGPVLVLAGAGTGKTAALTARLAHLIATRR
AWPSEILAVTFTNKAAREMRERVGRILGEGAEALPWLGTFHAIAAKMLRRHAELVGLQAN
YTILDTDDQLRLLKQLIVAAGLDEKRWTARALAGLIDRWKNRGWTPHEIDAAESEAFANG
RGAELYAAYQARLAAVNACDFGDLLLHMLVILKRHRDVLELYQQRFRYIMVDEYQDTNAA
QYLWLRLLAQSHRNICCVGDDDQSIYSWRGAEVANILRFEHDFPGAKTVRLEQNYRSTPH
ILAAASAVIAHNDSRLGKELWTALEAGERIGVIGVWDGPEEARRVGDEIEALRRGGGSYD
QAAILVRAQHQTREFEDRFIAIGLPYRIVGGFRFYERAEIRDALAYLRIVHQPADDLAFE
RIVNTPKRGLGDKAVARIHQLARAERLPLLLAAARLCDTDELSGAARKSLGRLVGDVARW
RDLSSSLPHAELCRQILDESGYTAMLQADRSAESGGRLENLTELARAMEEYETLGGFLEH
VSLVMDNDAAESGAKVTIMTIHAAKGLEFDTVFLAGWEEGLFPSQRALDEGGTKSLEEER
RLAYVAITRARRRCVILHAANRRIYGQWTSSIPSRFIGELPDDHIDAETTMTGGESLWRA
QWSEQTDPFADVGRGTGRGPGWQRAAALGEPAARAGNGARVVEVRASAASFAAKPRADMA
LGQRVFHSKFGYGAIRAIEGNKLEIEFEQAGTKHVLDSFVTPA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtcccccgcccccgcccccgcggccgagcccggctatcttcaaggcctcaac
ccggcgcagcgcgatgcggtgctgaccagcgacggccccgtgctggtgctggccggcgcc
ggcacgggcaagacggcggcgctcaccgcgcggctagcgcatctcatcgcgacgcgccgc
gcctggccgtcggaaatcctcgcggtcaccttcaccaacaaggcggcgcgcgagatgcgc
gagcgggtcggccgcattttgggcgagggcgcggaggcgctgccctggctcggcaccttc
cacgccatcgccgccaagatgctgcgtcgccatgccgaactggtggggcttcaggcgaac
tacaccatcctcgacacggacgatcagctgcgcctgctcaagcagctgatcgtcgccgcc
gggctcgacgagaagcgctggacggcgcgcgcgctggccgggctgatcgatcgctggaag
aatcgcggctggacgccgcacgagatcgacgccgccgagagcgaggccttcgccaatggc
cgcggcgccgaactctatgccgcctaccaggcccggctggcggcggtgaacgcctgcgat
ttcggcgatctgctgctccacatgctggtgatcctgaagcgccaccgcgacgtgctggag
ctgtaccagcagcgcttccgctacatcatggtggacgagtatcaggacaccaacgccgcc
caatatctctggctgcgcctgctcgcgcagagccaccgcaacatctgctgcgtcggcgac
gacgaccagtccatctattcatggcgcggcgccgaagtcgccaacattctgcggttcgag
catgatttcccgggcgccaagacggtccgcctggaacagaattaccgctccacgccgcac
atccttgccgccgcctcggcggtgatcgcgcacaatgattcgcggcttggcaaggaattg
tggaccgcgctggaagcgggcgaacggatcggcgtgatcggcgtgtgggacgggccggaa
gaggcgcgccgcgtcggcgacgagatcgaggcgctgcgccgcggcggcggcagctacgat
caggccgcgatcctcgtgcgcgcccagcaccagacgcgcgagttcgaggatcgcttcatc
gcgatcggcctgccctatcgcatcgtgggcggcttccgcttctacgagcgggccgagatc
cgcgacgcgctggcctatctccgcatcgtccaccagccggcggacgatctcgccttcgaa
cgcatcgtcaacacgcccaagcgcggcctgggcgacaaggcggtggcgcgcatccaccag
ctcgcccgcgccgagcgcctgccgctgctgctggcggcggcgcgactgtgcgataccgac
gagctgagtggcgcggcgcgcaagtcgctcggccggctcgtgggcgatgtggcgcgctgg
cgcgatctctcgtccagcctgccccatgccgaattgtgccgccagatcctcgatgagagc
ggctacaccgccatgctccaggccgatcgctccgccgagagcgggggccggctcgagaat
ctcaccgaactggcgcgcgccatggaggaatatgagacgctgggcggctttctcgagcat
gtcagcctggtgatggacaatgacgccgccgagtccggcgccaaggtcacgatcatgacg
atccatgccgccaagggcctggaattcgataccgtcttcctcgccggctgggaggagggc
ctattcccctcgcaacgcgcgctcgatgagggcggcaccaagagcctggaggaggagcgg
cggctggcctatgtcgccatcacccgcgcgcggcggcgctgcgtcatcctgcacgccgcc
aatcgccgcatctacggccaatggacctcgtccatcccctcgcgcttcatcggcgagctg
cccgacgaccatatcgacgccgagacgacgatgacgggcggcgagtccctgtggcgggcg
cagtggagcgagcagaccgacccctttgccgatgtcgggcgcggcaccgggcgcggcccc
ggctggcagcgcgcggcggcgctgggcgagcccgccgcgcgcgcgggcaatggcgcgcgc
gtggtcgaggtccgcgcctccgccgccagcttcgccgccaagccgcgcgcggacatggcg
ctgggccagcgcgtcttccattccaagttcggctatggcgcgatccgcgcgatcgaaggc
aataagctggagatcgagttcgagcaggccggcaccaagcatgtgctcgacagcttcgtg
acgcccgcctga
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