Sphingomonas morindae: LHA26_13645
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Entry
LHA26_13645 CDS
T08557
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smor
Sphingomonas morindae
Pathway
smor03030
DNA replication
smor03430
Mismatch repair
smor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHA26_13645 (dnaE)
03430 Mismatch repair
LHA26_13645 (dnaE)
03440 Homologous recombination
LHA26_13645 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smor03032
]
LHA26_13645 (dnaE)
03400 DNA repair and recombination proteins [BR:
smor03400
]
LHA26_13645 (dnaE)
Enzymes [BR:
smor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHA26_13645 (dnaE)
DNA replication proteins [BR:
smor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHA26_13645 (dnaE)
DNA repair and recombination proteins [BR:
smor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHA26_13645 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
COE1_HLH
Motif
Other DBs
NCBI-ProteinID:
USI72326
LinkDB
All DBs
Position
1:2772848..2776378
Genome browser
AA seq
1176 aa
AA seq
DB search
MHSPFVPLRVFTAFTMLEGAIDPKALAKAAAKRGFPAAAICDRNGLYAAMAFSAAAKAEG
VQPIIGALLGVARPAACGGAEEGKPPVIDWLPLFAQDATGYDNLCALVSAAHLDRPIEQD
AHVPMAALEGRTDGLIALTGAADGALARLYGEGQAAHGEAYADRLAALFPDRLFIELARR
GMAIEEQAEPALVALAYARGWPLVATNPACFLEPDFHGAHDAMLCIADSAYLDSDERRRS
LADAWLKPAEAMADAFADLPEAIANTALVATRTAFAAPKRKPILPSLAGDREGEAAMLRR
DARAGLEARLRHYQPEGPLEPRFAAYFERLDFETDIIVRMGFPGYFLIVADFIKWAKDHD
IPVGPGRGSGAGSVVAWALTITDLDPLRLGLLFERFLNPERVSMPDFDIDFCETRRGEVI
RYVQEKYGRDHVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLVPNHPTDPWTLER
ALNGVSELHTEVTREPQVRRLFDLAMKLEGFPRHSSTHAAGVVIGDRPLDQLVPLYRDPR
SDMPVTQFDMKHVEDAGLVKFDFLGLKTLSVLQKAVQMLARRGIAVDLAALAWDDPAVFE
LLMSGNTVGVFQLESEGMRRTLSAVRPTCFEDIIALVSLYRPGPMDNIPMFGARKNGREP
IEYPHPLLEGILKETYGIFVYQEQVMQAAQVLAGYSLGEADLLRRAMGKKIKAEMDAQRQ
RFIDGCAKNQIGADKANELFDLIDKFAGYGFNKSHAAAYALVAYQTAWMKAHHKPEFFAA
SMCYDMAQTDKLAVFVEDMRRMDVACLPPSINQSEAEFSVEPQGEGEGGAVRYALGALKG
VGERAMEELVAERRRGGAFASLEDFADRIDPRLLNRRQLESLAAGGAFEPLGLERAAVHG
GAETILAHAAAAHEARTSGQGGLFGGPADVPPIRLPGAHWTMAEAMAAEKEAFGFYFSAH
PTDRFRHLAQAHGCRSFAQVCAMPPGPPVQVDDRGRRQPQPSVAMAALIEGASWRTAAKS
GRRYLFAVCSDATGQYMASCFDDEVAVRIEEIAKAGGCAQLMVELDRREGDETPRVTIRA
VRPFEGMTMATRLRLDLWIEAEAAAAPVAALLAPARGGGKGELHIFATGPGGTPVHILAG
TDYLFDAELVARVERVPGIASARLAPFEAPRLALVG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcattccccgttcgtgccgctgcgagtcttcaccgccttcaccatgctcgagggcgcg
atcgatcccaaggcgctggccaaggccgccgccaagcgcggcttcccggccgccgcgatc
tgcgaccgcaacggcctctacgccgccatggccttctccgccgccgccaaggccgagggg
gtgcagccgatcatcggcgcgctcctgggcgtggcgcgcccggccgcctgcggtggcgcc
gaggaaggcaagccgccggtgatcgactggctgccgctcttcgcgcaggacgcgaccggc
tacgacaatctctgcgcgctcgtctccgcggcgcatctcgatcggccgatcgagcaggat
gcgcatgtgcctatggcggcgctggaaggccgcaccgacgggctgatcgcgctgaccggc
gcggccgatggcgcgctggcgcgcctctacggcgagggccaggccgcgcatggcgaggcc
tatgccgatcggctcgcggcgctcttccccgatcggctgttcatcgagctggcgcggcgc
ggcatggcgatcgaggaacaggccgagccggcgctggtcgcgctcgcctatgcgcgcggc
tggccgctggtggcgaccaatcccgcctgcttcctggagccggatttccacggcgcgcac
gacgccatgctgtgcatcgccgattcggcctatctcgattcggacgagcggcgccgctcg
ctcgccgatgcctggctcaagcccgccgaggcgatggccgacgccttcgccgatctgccc
gaggcgatcgccaacaccgcgctggtcgccacccgcaccgccttcgccgcccccaagcgc
aagccgatcctgcccagcctggcgggcgatcgcgagggcgaggcggcgatgctgcggcgc
gacgcccgcgccgggctggaggcgcggctgcgccactatcagcccgaggggccgctcgag
ccgcgcttcgccgcctatttcgagcggctcgacttcgagacggacatcatcgtccgcatg
ggctttccgggctatttcctgatcgtcgccgatttcatcaaatgggcgaaggatcacgat
atcccggtgggccccgggcgcggctcgggggcgggctcggtggtcgcttgggcgctcacc
attaccgatctcgatccgctgcggctggggctgctgttcgagcgcttcctcaatcccgag
cgcgtctcgatgccggacttcgacatcgatttctgcgaaacccggcgcggcgaagtgatc
cgctacgtgcaggagaaatacgggcgcgaccatgtcgcgcagatcatcaccttcggaaag
ctgaaggcgcgcgcagtgctgaaggataccggccgcgtgctgcagatgagctatggccag
gtggatcgcctcgccaagctggtgcccaaccatcccaccgacccctggacgctggagcgc
gcgctcaacggcgtctcggagctgcataccgaggtgacgcgcgagccgcaggtgcggcga
ctcttcgatctggcgatgaagctcgagggctttccccgccattcctccacccatgccgcg
ggcgtggtgatcggcgaccggccgctggaccagctggtgccgctgtatcgcgatccgcgc
tcggacatgcccgtcacccagttcgacatgaagcatgtcgaggatgcgggcctggtgaag
ttcgactttctcgggctgaagacgctgtcggtcctgcagaaggcggtgcagatgctggcg
cggcgcgggatcgcggtcgatctcgcggcgctcgcctgggacgatccggcggtgttcgag
ctgctgatgtccggcaatacggtgggcgtgttccagctcgaatccgagggcatgcgccgc
accctgtcggcggtgcggccaacctgcttcgaggacatcatcgcgctggtctcgctctac
cggcccggcccgatggacaatatcccgatgttcggcgcgcggaagaatggccgcgagccg
atcgaatatccgcatccgctgctggagggcattctcaaggaaacctacggcatcttcgtc
tatcaggagcaggtgatgcaggcggcccaggtgctggccggctacagcctgggcgaggcc
gacctgctgcgccgtgcgatgggcaagaagatcaaggccgagatggacgcgcagcgccag
cgcttcatcgacggctgcgccaagaatcagatcggcgcggacaaggccaacgaactgttc
gacttgatcgacaagttcgcgggctatggcttcaacaagagccatgccgccgcctatgcg
ctcgtcgcctatcagaccgcctggatgaaggcgcaccacaagccggaattcttcgccgcc
tcgatgtgctacgacatggcgcagaccgacaagctggcggtgttcgtggaggatatgcgg
cgcatggacgtcgcctgcctgccgccctcgatcaaccagagcgaggccgagttcagcgtc
gagccgcagggcgagggcgagggcggcgcggtgcgctacgcgctcggcgcgctcaagggc
gtgggtgagcgcgcgatggaggagctggtggcggaacgccgccgcggcggcgccttcgcc
agcctcgaggatttcgccgatcgcatcgatccccggctgctcaaccgccgccagctggaa
agccttgccgccggcggcgcgttcgagccgctgggccttgagcgcgcggcggtgcatggc
ggcgcggagacgatcctcgcccatgccgccgccgcgcacgaggcacgcaccagcgggcag
ggcggcctgttcggcggccccgccgatgtgccgccgatccgcctgccgggcgcgcactgg
acgatggcggaggcgatggcggccgagaaggaggccttcggcttctatttctcggcgcat
cccaccgatcgcttccgccacctcgcccaggcgcatggctgccgctccttcgcgcaggtc
tgcgccatgccgccggggccgccggtgcaggtggacgatcgcgggcggcgccagccccag
cccagcgtcgccatggcggcgttgatcgagggcgcgagctggcgcaccgccgccaagagc
ggccggcgctatctcttcgcggtctgctccgatgcgaccggccaatatatggccagctgc
ttcgacgacgaggtggcggtgcggatcgaggagatcgccaaggccggcggctgcgcgcag
ctgatggtggagctggaccggcgcgagggcgacgagacgccgcgcgtcaccatccgtgcg
gtccgcccgttcgagggcatgaccatggccacccggctgcgcctcgacctgtggatcgag
gccgaggcggcggcggccccggtggcggcgctgctcgccccggcgcggggcggcggcaag
ggcgagctgcacatcttcgccaccggcccgggcggtacgccggtgcacattctggccggc
accgactatcttttcgatgccgaactggtggcgcgggtggagcgggtgccgggcatcgcc
tcggcgcggctcgcgccgttcgaggcgccaaggctggcgctggtcggctga
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