Sphingomonas morindae: LHA26_16240
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Entry
LHA26_16240 CDS
T08557
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
smor
Sphingomonas morindae
Pathway
smor02010
ABC transporters
smor03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LHA26_16240
03070 Bacterial secretion system
LHA26_16240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smor02000
]
LHA26_16240
02044 Secretion system [BR:
smor02044
]
LHA26_16240
Transporters [BR:
smor02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LHA26_16240
Secretion system [BR:
smor02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LHA26_16240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Peptidase_C39
AAA_16
AAA_22
AAA_29
AAA_21
AAA_18
AAA_30
DUF294_C
NB-ARC
AAA_33
PRK
SbcC_Walker_B
Mg_chelatase
EMP70
nSTAND1
RsgA_GTPase
AAA_25
nSTAND3
AAA_24
Motif
Other DBs
NCBI-ProteinID:
USI72798
UniProt:
A0ABY4X791
LinkDB
All DBs
Position
1:3353861..3356026
Genome browser
AA seq
721 aa
AA seq
DB search
MDQIVGDPPVGARRPVFQSGALWALARVARYHRRAADPAVLAHELAVGRRPAAGRDIVRG
ARLLGLRARVLNGQTAARLEAAPRPLVIGLRNGRYGVLRRIRGEDALALPGGGGPKRIGS
AALAEIWSGEMILIAPEREPLEPGDRVDWRWFGGTVWRYRRPLAQVLVASLFVQLFALVT
PLFFQIIIDKVLVHKAYDTLMLVGGALVVINVFDVLLQWLRSYVLTHTSSRIDVELGSQL
YRKLLRLPLGYFEQRPTGQTVARVREIENIRSFLTGQGLTSLIDCLFTIIFLAVLFLYSV
KLGIIVTVMVPAYMLVVMLIRPWLRRRVNERFNRSAESQQFLVESIVGAATLKAAAVEPF
AAQQWEERLALYVGAAFRTQMLGTTGQMLIQYLTKLSTVLILFFGAQEVIEGRLTVGGLI
AFNMIANQMTAPVLRLANLWQDFQQVQVSVERLGDILNTPAEPEGGTAGQTPPPLKGAIA
FRGVTFRYAPETKPVLRDIDLAIAPGEVIGVVGPSGSGKSTLAKLIQRLYLPEAGQIRLD
GRPAEDVHTAWLRRQIGVVLQENLLFNRTVHENIALAAPKMPRAKVIAMARLAGADEFIR
ALPEGYDTRIVERGANLSGGQRQRLAIARALARDPRILIFDEATSALDFETEAIIQANMK
QIVAGRTVIIVAHRLAAVRDCDRIIGLRDGRIVESGSHAELLAAGGLYAGLWALQVQGAA
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatcgtcggtgatccgccggtcggcgcgcgccgcccggtgttccagagcggc
gccctgtgggcgcttgcccgcgtcgcgcgctaccatcgccgcgccgccgatcccgccgtg
ctggcgcacgagctggcggtgggccgccgtcccgccgccggtcgcgatatcgtgcgtggc
gcgcggctgctggggctgcgcgcgcgcgtgctgaacggccagacggcggcgcggctcgag
gcggcgccgcgtccgctcgtcatcggcctgcgcaacggccgctacggcgtgctgcggcgg
atccgcggcgaggatgcgctggcgctgcccggcggcggcggcccgaagcggatcggcagc
gccgcgctcgccgagatctggtcgggcgagatgatcctgatcgcgcccgaacgcgaaccg
ctggagccgggcgatcgggtggactggcgttggttcggcggaacggtatggcgctatcgc
aggccgctggcgcaggtgctcgtcgcctcgctgttcgtccagctgttcgcgctggtcacg
cccctcttcttccagatcatcatcgacaaggtgctggtccacaaggcgtatgacacgctc
atgttggtcggcggcgcgctcgtggtgatcaatgtcttcgatgtgctgctgcaatggctg
cgcagctatgtgctgacgcacacgtcgagccgcatcgatgtggagcttggcagccagctc
taccgcaagctgctgcggctgccgctcggctatttcgaacagcggccgaccgggcagacg
gtggcgcgggtgcgcgagatcgagaatatccggagcttcctcaccggccagggcctgacc
tcgctgatcgactgcctcttcaccatcatcttcctcgccgtgctcttcctctattcggtg
aagctcgggatcatcgtgacggtgatggtgccggcctatatgctggtggtgatgctgatc
cggccctggctgcggcggcgcgtcaacgagcgcttcaaccgcagcgccgagagccagcaa
ttcctggtggaatcgatcgtcggcgcggccacgctcaaggcggcggcggtggagcccttc
gccgcgcagcaatgggaggagcggctggccctttatgtcggcgcggccttccgcacccag
atgctcggcaccaccgggcagatgctgatccagtatctcaccaagctctcgaccgtgctg
atcctcttcttcggcgcgcaggaggtgatcgaaggacggctgacggtcggcggcctgatc
gcgttcaacatgatcgccaaccagatgaccgcgccggtcctgcgactggccaatctctgg
caggatttccagcaggtgcaggtctcggtcgagcggctgggcgatattctgaacacgccg
gccgagcccgagggcggcaccgccggccagacgccgccgccgctcaagggcgcgatcgca
tttcgcggcgtcacctttcgctacgcgcccgagaccaagcccgtgctgcgcgacatcgat
cttgcgatcgcgcccggcgaggtgatcggcgtggtgggcccctcgggctcgggcaagtcc
acgctcgccaagctcatccagcgcctctacctgcccgaggcggggcagatccggctcgat
gggcgccccgccgaggatgtccacaccgcctggctgcggcgccagatcggcgtggtgctg
caggagaatctgctcttcaaccgcacggtgcacgagaatatcgcgctcgccgcgccaaag
atgccgcgcgccaaggtgatcgcgatggcacggctggcgggcgccgacgaattcatccgc
gcgctgccggagggctatgacacgcgcatcgtcgagcgcggggccaatctttcgggcggc
cagcgccagcgcctcgccatcgcccgggcgctcgcgcgcgatccccgcatcctcatcttc
gacgaggcgaccagcgcgctcgacttcgagaccgaggcgatcatccaggccaatatgaag
cagatcgtggccggtcgcacggtcatcatcgtcgcccatcggctggcggcggtgcgcgac
tgcgatcgcatcatcggcctgcgcgacggccgcatcgtcgaaagcggaagccatgccgag
ctgctcgcggcgggcgggctctatgccgggctgtgggcgttgcaggtgcagggggcggcg
gcgtga
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integrated database retrieval system
