Sphingomonas morindae: LHA26_17355
Help
Entry
LHA26_17355 CDS
T08557
Name
(GenBank) PAS domain S-box protein
Organism
smor
Sphingomonas morindae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_4
PAS
PAS_9
Response_reg
HATPase_c
PAS_8
GAF
GAF_2
HisKA
GAF_3
HPTransfase
FleQ
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
USI74937
LinkDB
All DBs
Position
2:121241..125011
Genome browser
AA seq
1256 aa
AA seq
DB search
MTDRRAEQAIRATGEAARLINAFDWTATGLGPIARWPATLRSTVELILASPVPIVTLWGV
DGIMIYNDAYSVFAGARHPRLLGSKVREGWAEIADFNDNVMRVGLAGGTLQYRDQALTLD
RGGAPEPVWMDLDYSPIHGPDGTPIGVIAIVVETTGKVRAERALRDSEERYRILTEVSPQ
VVWMADAAGALTYCNAYWYAYSGMSEAETRGQGWLDAVHPDHRAAAQQGWRAAVAERDRW
SMELPLRRRDGAYRWHVTAGQPLLDGTGRCLSWSGIALDIHDRRTAEEELRDTGSRLDAV
LANTSMAIFVIDLSQACVFMNRAAERLTGWRLEDIRGRRLHDVIHHSHADGSPYPPEDCP
IERAFPTGAGFSGEETFVRRDGRFIPVALTASPVVDPRGGTMGTIIEARDISADRAAQAV
IARRGDQLRGLADAALAISLAPNPTARLDEVARAARRIVGAEQAVVSLTRGADWAQAITA
IELSPRYEAWRDYDRPPSGGGIYALVCEQNRPLRLTQAELERHPRWRGFSAEASAHPPMR
GWLAVPLVARDGSNLGLVQLSDKSDGGDFDEADEAMLVQLAQLAAAAIEQSETDAALRRS
EERYRAITDSVDQMIWATRADGYHDFFNQRWYDYTGVPVGSTEGEAWRGLFHPEDQARIE
AVWGASLTTGRPYHIEYRLRHRSGLYRWVIGRAQPVRDGEGRITRWYGSCTDIHDLKEAE
AALRDLTARLEERVREEVAERAKAEEALRQTQKMEAVGQLTGGIAHDFNNLLTVVTGNID
MAGRALDAAGAPDPRARRALDNAMKGADRAAALTQRLLAFARRQPLAPKPIDVDRLVAGM
SDLLNRALGETVRLEVVTTPGLWRVEADPNQLESAILNLAVNARDAMPAGGTLAIETANA
MLDQAYAGAHAEVAPGPYVLISVSDTGMGIPREAMERVFEPFYTTKEVGRGTGLGLSMVY
GFVKQSGGHVKLYSEEGRGTTVKIYLPRLLGSLPEPIEEGEGATGIERSQRAETILVVED
DDDVRAYTVEILRELGYRVLEAHDGMSGLRLFERQEAPIDLLFTDVVMPGMTGAALAEQA
RALQPGLRVLYTSGYTRNAIVHGGRLDAGVEMISKPFTFRALAAKVRDMLEIGRTGRLLL
VEAEPTIRALTAEALAAIGYAVDQAATATEALARLRAAQGRYDAALIDADLPDQAAAALL
VELRARHAAMPVLLAGDLPGPAEAAPDPLVAALPKPFTAAMVEDRLRALGVGDPPG
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgacggacagaagggcggagcaggcgatcagggcgacgggcgaagcggcgcggctgatc
aacgccttcgactggaccgccacgggcctgggcccgatcgcgcgctggccggccacgctg
cgcagcacggtggagctgatcctcgcctcgccggtaccgatcgtcacgctgtggggcgtc
gacggcatcatgatctacaatgacgcctattcggtcttcgccggcgcgcgccatccccgg
ctgctcggctccaaggtgcgcgagggctgggcggagatcgcggacttcaacgataatgtg
atgcgtgtcggccttgccggcggaacgctgcaatatcgtgaccaggcgctcaccctggat
cgcggcggcgcgcccgagccggtgtggatggacctggactattcgccgatccacggtccg
gacggcacgccgatcggcgtgatcgcgatcgtcgtcgagacgaccggcaaggtccgcgcc
gagcgcgcgctgcgcgacagcgaggaacgctatcgcatcctcaccgaagtcagcccccag
gtcgtgtggatggccgatgccgcgggcgcgctcacctactgcaacgcctattggtacgcc
tatagcgggatgagcgaggccgagacgcgcggccagggctggctcgacgcggtgcatccc
gatcatcgcgcggcggcgcagcagggctggcgggcggcggtggccgagcgcgaccgctgg
tcgatggagctgccgctgcggcggcgcgacggcgcctatcgctggcatgtcaccgccggc
cagccgctgctcgacggcaccgggcgctgcctctcctggtccggcatcgcgctcgacatc
cacgatcggcgcaccgccgaggaagagctgcgcgacaccggcagccggctggatgccgtg
ctcgccaataccagcatggccatcttcgtcatcgatctgagccaggcctgcgtcttcatg
aaccgcgccgccgagcggctgaccggatggcggctggaggatattcgcggccgccgcctg
catgacgtgatccaccacagccatgccgatggcagcccctatccgcccgaagactgcccg
atcgagcgcgcctttcccaccggcgcgggctttagcggcgaagagacgttcgtgcgccgc
gacggtcgcttcatccccgtcgcgctcaccgcctcgccggtggtcgatccgcgcggcggc
acgatgggcacgatcatcgaggcgcgcgacatcagcgccgatcgcgccgcccaggccgtg
atcgcgcgccgcggcgatcagctgcgcggcctggccgacgcggcgctcgccatctcgctc
gcgcccaatcccaccgcgcggctggacgaggtggcgcgcgccgcccgccgcatcgtcggc
gccgaacaggccgtggtcagcctgacgcgcggcgcggactgggcgcaggcgatcaccgcg
atcgagctttcgccgcgctatgaggcgtggcgcgactatgaccggccgcccagcgggggc
ggcatctacgccctggtctgcgaacagaatcgtccgctgcgcctcacccaggcggagctg
gaacgccatccgcgctggcgcggcttcagcgcggaggccagtgcccatccgccgatgcgg
ggctggctggcggtgccgctggtggcgcgcgacggaagcaatctcggcctggtccagctc
agcgacaaaagcgacggcggcgatttcgacgaggcggacgaagcgatgctcgtccagctc
gcccagctcgccgccgccgcgatcgagcagagcgagaccgacgccgcgttgcgccgcagc
gaggaacgctatcgcgcgatcaccgattcggtcgatcagatgatctgggcgacgcgcgcc
gacggctatcacgacttcttcaaccagcgctggtacgattatacgggcgtgcccgtcggc
tccaccgaaggcgaggcgtggcgcggcctcttccatcccgaggatcaggcgcggatcgag
gcggtgtggggcgcgagcctgacgaccggccggccctatcatatcgaatatcggctgcgg
caccgctccggcctctaccgctgggtgatcggccgtgcccagccggtgcgcgacggcgag
ggccggatcacccgctggtatggcagctgcaccgatatccatgatctcaaggaggcggag
gcggcgctgcgcgatctcaccgcgcggctggaggagcgggtgcgcgaggaggtggccgag
cgcgccaaggccgaggaggcgctgcgccagacccagaagatggaggcggtgggccagctc
acgggcggaatcgcgcatgatttcaacaatctgctgacggtcgtcacgggcaatatcgat
atggcggggcgcgcgctcgatgccgccggcgcgcccgatccgcgcgcccggcgtgcgctc
gacaacgccatgaagggcgccgaccgcgccgccgcgctcacccagcgcctgctcgccttc
gcgcggcgccagccgctcgcccccaagccgatagatgtcgaccggctggtcgcgggcatg
tccgatctgctcaaccgcgcgctcggcgagacggtgcggctggaggtcgtcaccaccccc
ggcctgtggcgggtggaggccgatcccaaccagctcgaaagcgcgatcctcaatctcgcc
gtaaacgcccgcgacgccatgcccgccggcggcacgctcgccatcgagacggccaatgcg
atgctcgaccaggcttatgccggcgcccacgcggaagtggcgcccggcccctatgtgctg
atctcggtgtccgacaccggcatgggcattccgcgcgaggcgatggagcgggtgttcgag
cccttctacaccaccaaggaggtggggcgcggcaccgggctcggcctctcgatggtctat
ggcttcgtcaaacagtcgggcggccatgtgaagctctattcggaggaagggcgcggcacg
acggtgaagatctatctgccccgcctgctcggcagcctgcccgaaccgatcgaggagggt
gaaggcgccaccggcatcgagcggagccagcgcgccgagacgatcctcgtcgtcgaggat
gatgacgatgtccgcgcctatacggtcgagatcctgcgcgagctcggctatcgcgtgctc
gaggcgcacgatggcatgtccgggctgcggctgttcgagcggcaggaggcgccgatcgat
ctgctcttcaccgatgtggtgatgccgggcatgacgggggcggcgctggccgaacaggcg
cgcgcgctccagccggggctgcgcgtgctctatacgtcaggctatacgcgcaacgcgatc
gtccatggcggccggctcgacgcgggggtggagatgatctccaagcccttcaccttccgc
gcgctcgccgccaaggtgcgcgacatgctcgagatcggccgcaccgggcggctgctgctg
gtggaggccgagccgaccatccgcgcgctcaccgccgaggcgctggcggcgatcggctat
gccgtcgatcaggccgccaccgccaccgaggcgctcgcccggctgcgcgccgcccagggc
cgctacgacgcggcgctgatcgatgccgatctgccggaccaggccgccgccgccttgctg
gtggagctgcgcgcgcgccacgcggccatgccggtgctgctcgccggcgatctccccggc
ccggccgaagcggcgccggatccgctggtcgccgcgctccccaagcccttcaccgccgcc
atggtggaagaccggctgcgcgcgcttggcgtgggcgacccgccgggctga
DBGET
integrated database retrieval system
