Sphingomonas morindae: LHA26_18425
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Entry
LHA26_18425 CDS
T08557
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
smor
Sphingomonas morindae
Pathway
smor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LHA26_18425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smor03400
]
LHA26_18425
DNA repair and recombination proteins [BR:
smor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LHA26_18425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
USI74726
LinkDB
All DBs
Position
2:complement(368314..369081)
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AA seq
255 aa
AA seq
DB search
MGIGRIRVIDLETTGSAPPAHGVCEIGWQDVVERDGAWQVDAARGALLIDPGRPIPAVTM
AVHHITDADVAGAPFWAAAAPAILRPEGGVIALAAHRAAFEQRFCTPRLTGGAAWICTWK
CALRLWPDSPSFSNQVLRYWRRPEGLVQALGLPAHRALPDAYVTAHHLRDMLNTAPLADL
LAWSAEPGLLPRVPSGLAHSRHWHELDEAALRRLAKDRGEDVRFSAEMELRRRSGAGEAG
GETAAAPPQAQGVLL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgggcgtattcgcgtgatcgatctcgagaccaccggctcggcgccgcccgcg
cacggcgtgtgcgagatcggctggcaggatgtggtggagcgcgacggtgcgtggcaggtg
gatgcggcacgcggcgcattgctgatcgatccgggccgaccgatccccgccgtgacgatg
gcggtgcatcatatcaccgacgccgacgtcgcgggcgcgcccttctgggcggcggcggcg
ccggccatcctgcggccggagggcggggtgatcgcgctcgcggcgcatcgcgcggcgttc
gagcagcgcttctgcacgccgcggctgaccgggggcgcggcctggatctgcacctggaaa
tgcgcgctgcggctctggccggacagcccgagcttctccaaccaggtgctgcgctattgg
cggcggcccgaagggctggtgcaggcgctgggcctgcccgcgcatcgcgctttgccggac
gcctatgtcaccgcgcatcatctgcgcgacatgctcaacaccgcgccgctcgccgatctg
ctcgcctggagcgccgaacccggcctcttgccgcgcgtgccgagcggattggcgcacagc
cgccactggcacgaactggacgaggcggcgctgcggcggctggcaaaggatcgcggcgag
gatgtgcgcttctccgccgagatggagctgcgtcgccggagcggcgcgggcgaggcgggc
ggcgagacggcggcggcgccccctcaggcgcagggcgtgctgctatag
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