Sordaria macrospora: 10800920
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Entry
10800920 CDS
T01610
Symbol
SMAC4_08834
Name
(RefSeq) uncharacterized protein
KO
K12830
splicing factor 3B subunit 3
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10800920 (SMAC4_08834)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
10800920 (SMAC4_08834)
03041 Spliceosome [BR:
smp03041
]
10800920 (SMAC4_08834)
03036 Chromosome and associated proteins [BR:
smp03036
]
10800920 (SMAC4_08834)
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
10800920 (SMAC4_08834)
Spliceosome [BR:
smp03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
10800920 (SMAC4_08834)
Complex B
10800920 (SMAC4_08834)
Complex C
U2 SnRNP specific factors
10800920 (SMAC4_08834)
Chromosome and associated proteins [BR:
smp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
10800920 (SMAC4_08834)
TFTC complex
10800920 (SMAC4_08834)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
10800920
NCBI-ProteinID:
XP_003343663
UniProt:
F7VYN0
LinkDB
All DBs
Position
4:join(1405678..1405921,1406107..1408183,1408407..1409688,1409760..1409786)
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AA seq
1209 aa
AA seq
DB search
MATTSNMFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLL
SHDIFGIVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRR
VIPGQYLAADPKGRACLISSLEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALD
VGYANPVFAALEIDYSDADQDPTGQAREEVETQLVYYELDLGLNHVVRKWSDTVDRTSSL
LFQVPGGNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRKGATEDPQRKRVIVSGVMHKL
KGSAGAFFFLLQTDDGDLFKITIDMIEDADGNPTGEVKRLKIKYFDTIPVATSLCILKSG
FLFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESI
DSMNPQVDCKVANLTGDDAPQIYSVCGNGARSTFRSLKHGLEVSEIVASELPGTPSAVWT
TKLTKYDQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTTAPTLAVRQMGEDGLIQVHP
KGIRHIVQGRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYDEKKE
MSGTVTSLSVGQVPEGLKRSSFLAVGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSI
MSMEDSFGGFTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQDQPC
VLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRIFSIEK
LGDNMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTLPPELRAKLLEQQSNGDATILPP
EDFGYPKAKGRWASCISIIDPISDEPRVLQRIDLDNNEAAVSAAIVPFASQEGESFLVVG
TGKDMVLNPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPMALIPFQGRLLAGVGKTLR
IYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIVGDLQQGVTYVVYKAEGNRLIPFVDDT
LNRWTTCTTMVDYESVASGDKFGNISIVRCPERVSQDTDEPGSEIHLMHARNYLHGTPNR
LSLQVHFFTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGVFIPFVSREDVDFFQNLENHM
RAEDPPLAGRDHLIYRGYYTPVKGVIDGDLCERFSLLPNDKKQMIAGELDRSVREIERKI
SDIRTRSAF
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacatcgaacatgttcctgtattccttgaccatccagccacccaccgctgtc
acgcaggctctgcttggtcagttctcaggaaccaaggaacagcagattcttacggcgtct
ggatcgcgtctaaccctcctccagcctgatccccgtcagggcaaggtcaacaccctgctg
tctcatgacatcttcggcatcgtacgcgccatcgcgtcgttccgtctggccggcagccac
aaggactacattattctcgccactgattcgggccgcatcacgattatcgagtatcttccc
aagacgaacaagttccagcgcatccacctcgagactttcggcaagtcgggcgtccgccga
gtcatccccggccagtacttggccgcagaccccaagggaagagcctgccttatttcgtca
ctggaaaagaacaagctggtctatgttctcaaccgcaactcacaggccgagcttaccatc
tcgtcaccgctagaagcccacaagccaggagtgctggtgctgtctcttgtggcccttgac
gttggttacgccaaccccgttttcgccgcgttggaaatagattactcggacgcggatcag
gaccctacgggccaagcacgagaagaagtcgagacacagctggtatactacgagcttgat
ttgggcctgaaccacgttgttcgcaagtggtcggatactgtcgatcgtacttcttcgctg
ctcttccaagtaccgggcggtaatgacggtcccagcggtgtgttggtttgcggcgaggaa
aatgttacttatcgacactcgaaccaagaggccttccgcgttcctatccccagacgtaag
ggcgctaccgaggatcctcagaggaagcgtgtcatcgtctctggcgtgatgcacaagctc
aaggggagcgcgggcgcctttttcttccttcttcagacggatgatggagatctcttcaag
atcaccattgacatgatcgaagatgctgacggtaaccccactggggaggttaagcgcctg
aagatcaagtacttcgatacgataccagtagcaaccagcctttgcatcctgaagagcggc
ttcctgttcgccgctagcgagtttgggaaccatcacttctaccagttcgaaaaacttgga
gacgatgacgaggagctcgagttcagcagcgacgactttccgacagaccctaccgcctcg
tataacccggtgtacttccaccccaggccacttgaaaacttggtcctggttgagagcatt
gattcgatgaaccctcaggttgattgcaaggttgcgaacctgacgggtgacgatgcgccc
cagatctactctgtctgtggaaatggtgcgcggagtacttttcgctcgttgaagcacgga
ctcgaagtgtctgaaattgtcgcttcagagctcccgggtacgccttccgcggtgtggacg
accaagttgaccaagtacgaccagtacgacgcttacattgtgctgtcattcacaaatgga
actttggtgctcagcattggcgagacagttgaggaggtcagcgatagcggttttttgact
actgcgcctaccctagctgtccggcaaatgggtgaggacggcttgatccaagttcacccc
aagggtattcgccacatcgtccaaggtcgtgtcaatgaatggcctgcgcctcagcatcgg
tcgattgttgctgctacggcaaacgagaatcaggtcgtgattgctttgagctctggcgaa
attgtctacttcgaaatggactcggatggctcgctcgccgagtatgacgaaaagaaggag
atgtcgggaaccgtcacatcgctgagtgttggtcaagtaccagagggcctcaagcgaagc
tcgtttctagctgtaggatgtgatgattgcacagttcgcattcttagcttggaccctgac
tcgacgctcgagatgaagtccatccaagcgttgacagctgcaccctcggctctgtccata
atgtccatggaggactcgttcggtggcttcaccctctatctgcacattggtctgcattcg
ggtgtataccttcgaacagtgctggatgaggtcacgggtgaactaacagacactcgtcaa
aagtttctaggccccaagcctaccaaactcttccaagtatctgttcaagatcagccatgt
gttcttgcgctgagctcgaggccatggctgggctacaccgacccactgaccaaggggttt
atgatgacccctctaagttacactgagcttgagtatggctggaacttcagcagcgaacag
tgcttggaaggcatggtcggaattcatgctaattacttgagaatcttttcgatcgaaaag
ctgggagacaacatgatccagaaatccattcctttgacttacacaccaaagcgcctagtc
aagcatcccgaacagccttacttttacactatagagtccgataataacacgcttcccccg
gagctgcgggcaaagcttctggagcaacaaagcaatggtgatgcgacgatactgccgcca
gaggattttggatatcccaaggctaagggcagatgggcatcatgcatcagcattatcgat
cctatcagcgacgaaccgagagtcctccaaaggatcgatctcgacaacaatgaggcggca
gtcagtgcggctattgtaccctttgccagtcaagagggtgaaagtttcttggtagtcggc
acaggcaaggacatggtccttaacccacgtcaattcaccgagggctacatccatgtctac
agattccatgaggatggccgggatctggagttcatccacaagacccgagtggaagagcca
cctatggcactcatcccgttccagggtcgtctgctggctggcgtgggcaagacacttcgc
atctacgacctcggtttgaagcagctgctcagaaaggctcaagcagatgtgacgcccacc
ctgatcgtgtccctacaaagccagggcaaccgcatcattgtcggcgatctccagcagggt
gtcacttacgttgtctacaaggccgagggcaacagactcatccccttcgtcgacgacacc
ctaaaccgctggacaacctgcactaccatggtcgactacgaatccgtcgccagcggcgat
aagttcggcaacatttccatcgttcgctgcccagagcgcgtcagtcaggacactgacgag
cctgggtcagagatccacctgatgcacgcccgcaactaccttcacggcacacccaaccgc
ctgagcctgcaggtccacttcttcactcaggacttgccgaccagcatttgcaagaccagc
ctggtggtcggtggtcaggacgtgctgctctggagcggtttgcagggcactgtcggtgtc
ttcattccctttgtcagccgtgaggatgtcgactttttccagaatctggagaaccacatg
cgcgctgaggacccgccgcttgcgggccgtgaccacttgatctacagaggttattacacc
cccgtcaagggcgtgattgatggtgacttgtgcgagaggttcagcttgctgccgaacgat
aagaagcagatgattgcgggagaacttgatcgctcggtgagggaaattgagcgcaagatt
tcggatatccgcaccaggtctgccttctaa
DBGET
integrated database retrieval system
