Sordaria macrospora: 10800942
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Entry
10800942 CDS
T01610
Symbol
SMAC4_08845
Name
(RefSeq) uncharacterized protein
KO
K03265
peptide chain release factor subunit 1
Organism
smp
Sordaria macrospora
Pathway
smp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
10800942 (SMAC4_08845)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10800942 (SMAC4_08845)
03012 Translation factors [BR:
smp03012
]
10800942 (SMAC4_08845)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
10800942 (SMAC4_08845)
Translation factors [BR:
smp03012
]
Eukaryotic type
Release factors
10800942 (SMAC4_08845)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
10800942
NCBI-ProteinID:
XP_003343676
UniProt:
F7VYP3
LinkDB
All DBs
Position
4:complement(join(1457865..1459001,1459075..1459124,1459271..1459355,1459457..1459489))
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AA seq
434 aa
AA seq
DB search
MDPNANEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEYGTAS
NIKSRVNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTSEGKERKVNIDFEPFKPI
NTSLYLCDNKFHTEALAELLDSDQKFGFIIMDGNGALFGTLSGNTRDIVHKFSVDLPKKH
GRGGQSALRFARLREEKRHNYVRKVAELAVQCFITNDRPNVAGIVLAGSADFKNDLNASD
LFDPRLQTKVVKVVDVSYGGENGFNQAIELSSETLGNVKFIQEKKLIGKYFEEISQDTGR
ICYGIEDTLKALELGAVETLIVFENLEVNRWVLKDSNGSQVILHTTKAQEQASRDSFMDK
ETGQEMEVVSQESFLEWIAEHYKDFGTTLEFVSDRSTEGNQFVKGFGGIGGILRYKVNFE
QLADVSDDDEYYDD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacgccaacgaggccgagaagaacatcgagatatggaaggtcaagaagctt
atcaagcgtcttgaggccgcccgtggcaacggtacctccatgatctcgctcatcatccct
cccaaggatcagatctccagagctgctaagatgttggctgaagaatatggcactgcctcg
aacattaagtcgcgtgtcaaccgtcagtccgtcctttcggccattacctcgacccagcaa
aggctcaagctgtacaacaaggtgcctcccaatggtcttgtcgtgtactgcggtgaaatc
ttgacctccgaaggcaaggagagaaaggtcaacatcgatttcgagcctttcaagcccatc
aacacctccctctacctttgcgacaacaagttccacaccgaggctctcgccgagcttctc
gactccgaccagaagttcggtttcatcattatggatggtaacggtgccctgttcggtacg
cttagtggaaacacccgcgacatcgtccacaagttctccgtcgatcttcccaagaagcac
ggtcgtggtggtcagtccgccctgcgttttgcccgtctccgtgaggaaaagcgtcacaac
tacgtccgcaaggtcgccgaattggccgttcagtgcttcatcaccaacgataggcccaac
gttgccggtatcgttctggctggttccgccgatttcaagaacgacctgaacgcctccgac
ttgttcgatccccgtcttcagaccaaggtcgtcaaggttgtcgatgtctcgtacggtggt
gaaaacggcttcaaccaggccatcgagctgtcttccgagaccctcggaaacgtcaagttc
atccaggagaagaagctcatcggcaagtacttcgaggagattagccaggataccggccgc
atctgctacggtattgaggataccctcaaggctttggagcttggcgccgtcgagaccctc
atcgtcttcgagaacctcgaggtcaaccgctgggttctcaaggatagcaacggatcccag
gtcatcctgcatactaccaaggcacaggagcaggccagccgcgatagtttcatggacaag
gagacaggccaggagatggaggtggtttcccaggagtccttccttgagtggattgccgag
cactacaaagattttggtaccacactcgaattcgtttccgaccgttctaccgagggcaac
cagttcgtcaagggtttcggtggtatcggcggtattctccgctacaaggtcaatttcgag
cagctagctgacgtcagcgacgatgatgagtactacgacgattga
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integrated database retrieval system
