Sordaria macrospora: 10801029
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Entry
10801029 CDS
T01610
Symbol
SMAC4_04432
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
smp
Sordaria macrospora
Pathway
smp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
10801029 (SMAC4_04432)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10801029 (SMAC4_04432)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
10801029 (SMAC4_04432)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
10801029 (SMAC4_04432)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
10801029
NCBI-ProteinID:
XP_003343774
UniProt:
F7VYY2
LinkDB
All DBs
Position
2:join(1391401..1391874,1391947..1392117)
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AA seq
214 aa
AA seq
DB search
MATTSSSPSMAIPGQFLGPVSKFQPGPGTHIHESNLCASLLGVVNITQPAKAPGPAKRLN
KIINTQTSPAELPTISVLRAAGSSDKREVLPEVGNIVLCRVIRIMPRQAVVAILICGDTV
LEAEWQGLIRVQDVRATEKDRVKIYDSFRPGDIVRAEVISLGDQASYYLSTARNELGVIM
ATSEAGNTMYPVNWKEYKDPETGLSEPRKVAKPY
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacatcctcctccccttcgatggccatccccggccaattcctcggccctgtc
tccaagttccaacccggtcctggaacccacatccacgagtcgaacctctgcgcttcgctg
ctcggcgtcgtcaacatcacacagcccgccaaggcgcccggccctgcgaagcgcttgaac
aagattatcaacacccagacttcgcccgccgagctaccgaccatctcagtactgcgcgcg
gcgggttcgtcagacaagcgcgaggttctgcccgaagtgggcaacattgtgctatgccgg
gtgattcgcatcatgccgcgccaagcggtcgtggccatcttgatttgtggcgatactgtt
ttggaggccgagtggcagggcctgattagagtgcaggacgtgagagcgacagagaaggat
agggtgaagatctacgatagcttcaggcctggggatattgttagagctgaggtgatttct
cttggtgaccaagcaagctactacctatcgacggcgcgtaacgagcttggtgtcatcatg
gcgacaagcgaagctggcaacaccatgtaccccgtcaactggaaggaatacaaggaccct
gaaactgggcttagcgaacctagaaaggttgcgaagccctactga
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