Sordaria macrospora: 10801072
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Entry
10801072 CDS
T01610
Symbol
SMAC4_04476
Name
(RefSeq) uncharacterized protein
KO
K13095
splicing factor 1
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10801072 (SMAC4_04476)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
10801072 (SMAC4_04476)
Spliceosome [BR:
smp03041
]
Complex A
Other components
Complex A specific factors
10801072 (SMAC4_04476)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_6
zf-CCHC_4
zf-CCHC_3
zf-CCHC_2
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
10801072
NCBI-ProteinID:
XP_003343817
UniProt:
F7VYT9
LinkDB
All DBs
Position
2:complement(join(1545992..1546660,1546717..1547043,1547108..1547331,1547529..1547746,1547817..1548241))
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AA seq
620 aa
AA seq
DB search
MSWRNQGITGSNNIPLGSRRRFPGDEGEEMDGARSVTPTAPSSVTNGDRDRERDNGPVYS
NDRDVKRGRSPERSEDGPKRRKKRNRWGEATENKAAGLMGLPTAIVANMTSEQLEAYTLH
LRIEEITQKLKIDDVVPADGDRSPSPAPQYDNHGRRVNTREYRYRKKLEDERHKLIEKAM
KTIPNYHPPSDYRRPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIR
GKGSVKEGKGRSDAAHSSNQEEDLHCLIMADTEEKVNKAKKLIHNIIETAASIPEGQNEL
KRNQLRELAALNGTLRDDENQACQNCGQIGHRKYDCPEKQNYTANIICRVCGNAGHMARD
CPDRQRGASWRNDGPGAPRTAGRIGSSGGGDAVDREYEQLMQELGGTGAAPARIEAGPGS
FSNGGAGGGGGGSGDAKPWQRGPTGGPAPWRTRNSDRDHEGGPGGPGGPPSGPSGGPAPW
ARDRGERRHDDRDRDRGDSYYGGDRRHDDYGRGPSGGGGGGGPAPWHQPPPGAPSAPAIP
AAPAYPGAYGGYPGYGAPPGMGAAPPPGLPPPPPGAPPGLSGPLNALIQQYANAAPPPPP
PAAEAPPPPPMDLPPPPPGA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggagaaaccaaggaatcacgggttccaataacatcccgctgggaagcaggcgt
cgcttccctggcgatgaaggggaagagatggatggcgctcgcagcgtaacaccaacggcc
ccatcatctgtcaccaacggcgacagagacagagagagagacaacggccccgtttacagc
aatgatcgcgacgtcaagcgcggccgcagccccgaacggtccgaggatggtcccaagcgc
cgcaagaagcgcaaccgttggggtgaagcgactgagaacaaggccgccggattgatgggc
cttcctaccgccatcgtcgccaacatgacaagcgaacaattggaggcctacaccttgcat
cttcgcatcgaggaaatcacccagaagctcaagattgacgacgttgttcccgctgatgga
gacagatcgccctctcctgctccccagtacgacaaccatggtcgtcgtgtcaacacccgc
gaataccgttaccgcaagaagctcgaggatgagcgccacaagctcatcgagaaggcgatg
aagacgatccctaactatcacccgccctcggactatcgtagacctacaaagacccaggag
aaggtctacgtcccggttaacgactacccagagattaacttcattggcttgcttatcggt
cctcgtggcaatacactcaagaagatggaaacagaatctggcgccaagattgccattcgt
ggaaagggctccgtgaaggagggcaagggccgttctgacgctgcccactccagcaaccag
gaagaggacctgcactgtctcatcatggcagataccgaagagaaggttaacaaagccaaa
aagctgattcacaatattattgagacagctgcttcgatccctgaaggccagaacgagctc
aagcgtaaccagctccgtgagcttgctgccctcaacggtaccctgcgtgatgatgagaac
caagcctgccagaactgcggccaaatcggtcatcgtaaatatgattgccccgagaagcag
aactacactgccaacattatctgccgtgtctgcggtaacgccggccatatggctagggat
tgtcctgacaggcagaggggtgcaagctggagaaacgatggtcccggtgctccccgtacc
gctggtcgtattggtagcagtggtggcggcgatgccgtggaccgcgagtacgagcaactc
atgcaagaactcggcggtaccggtgctgctcctgctcgtatcgaagctggccctggctct
ttcagcaatggtggtgctggcggtggcggcggcggcagcggcgatgccaagccctggcaa
cgcggacctactggcggccctgctccctggcgtactcgcaactcggatcgggatcacgaa
ggtggccccggtggccctggtggccctcccagcggaccctctggtggccccgctccttgg
gctcgtgaccgtggcgagcgcagacatgatgatcgcgatcgcgatagaggagatagctac
tacggcggtgatcgcaggcatgacgactacggcagaggcccctcgggtggtggtggcggc
ggcggccctgccccttggcatcaacctccccctggagccccgtctgccccagcgattccc
gcagctccggcctatcctggtgcttatggtggttatcccggctatggtgctcctcccggt
atgggcgctgccccgcctcccggattgcctcctccgcctcctggagctcctcccggcctg
tctggaccgcttaacgccctcatccagcaatatgccaacgcggctcctcccccgccccct
ccggcagctgaggcaccccctccgcctcccatggacctccctcctccccctcccggcgct
tga
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