KEGG   Sordaria macrospora: 10801449
Entry
10801449          CDS       T01610                                 
Symbol
SMAC4_08817
Name
(RefSeq) uncharacterized protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
smp  Sordaria macrospora
Pathway
smp03020  RNA polymerase
smp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    10801449 (SMAC4_08817)
  09124 Replication and repair
   03420 Nucleotide excision repair
    10801449 (SMAC4_08817)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smp03021]
    10801449 (SMAC4_08817)
   03400 DNA repair and recombination proteins [BR:smp03400]
    10801449 (SMAC4_08817)
Transcription machinery [BR:smp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     10801449 (SMAC4_08817)
DNA repair and recombination proteins [BR:smp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      10801449 (SMAC4_08817)
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_Nudix RUBY_RBDX A2L_zn_ribbon
Other DBs
NCBI-GeneID: 10801449
NCBI-ProteinID: XP_024511751
LinkDB
Position
4:complement(join(423185..423229,423294..423383,424176..424433))
AA seq 130 aa
MSSPAPSSTGGAKEKKPLEQITFRFCSECSNMLYPREAEDENKLLFTCRTCNFSEPATST
CIYRNILNNAAGETAGVTQDVGSDPTLPRAINECPACHHPEAVFFQSQQRTSETGMKLFY
VCCDCGNIYQ
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtcgtcgcccgccccctccagcaccggtggcgccaaggagaagaagcccctcgagcag
atcacattccgcttctgctcggaatgcagcaacatgttgtacccccgcgaggccgaagac
gagaacaagctgctcttcacctgccgcacctgcaacttttccgagcccgccacgtcgact
tgcatctaccgcaacattttgaacaacgctgccggcgagaccgctggtgtcacgcaggat
gtcggctctgatcccacgctcccaagagccatcaacgaatgccctgcctgccaccacccg
gaagccgtctttttccagtcccagcagcgtacttcggaaaccggcatgaaactcttctac
gtctgctgcgattgcggtaacatttaccagtag

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