Sordaria macrospora: 10801562
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Entry
10801562 CDS
T01610
Symbol
SMAC4_06482
Name
(RefSeq) uncharacterized protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
smp
Sordaria macrospora
Pathway
smp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
10801562 (SMAC4_06482)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smp03009
]
10801562 (SMAC4_06482)
Ribosome biogenesis [BR:
smp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
10801562 (SMAC4_06482)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
HEAT_2
HEAT
GNC1_N
Motif
Other DBs
NCBI-GeneID:
10801562
NCBI-ProteinID:
XP_065946754
LinkDB
All DBs
Position
4:complement(join(1196558..1197448,1197500..1201972))
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AA seq
1787 aa
AA seq
DB search
MSSLASQLAQIAANSRSTLNTKVLKAAHSKSLIFEPRVAATQTYPEIYSICLEGFEELCN
LDSRFAKFAQSLWSEQSQEADRTQMTAAENAALDKHVEAFLHLCGSRLRLMPTIKAIEWL
IRRFRIHEFNTAALIATFLPYHTIPAFVTLLSILPANIPKEYRFLDPYIRSLTAPPRAAI
VQQATNRPELLTAISQYTLDSCKYQMEYPGLISFWGGVMVEATNGLLDKYRSGRRSIQIE
NDNALMQQLAPVLSDAMVMKSSPGLQIASYMVVTILAAKGGLADNALTAFMDQLVHGWTP
ETMRPGLVTLCIISQHRSAKQLSARVTKALLKVPELASVMNQIGKDHRVDKLANGLALAL
VDRLHKKGDVRSLPVVNSLLLGNVLREKQIKVVYKSLLVAAHRINDQVDQDGAIRKELGT
ILVSLSQAGGEVGDIVRATIEEVDFDIDALELTLGASIRPKLAVEDAPEAAAEDTTPKVD
KEAELAQNFEKLSKLKPQSASCFAEEPLDLLEELYSLFLSVAANETNLQKFDEAPVLSHP
QAPTRLFYASFYMRLWCGSLPTLAKVAALERVKNLLKDDEFSKLDFQAVVPYAIVALSDP
AKKVRRAAAELITVLGSFYQTKPSKVRRVWGSEGLYTKTAPVSWLDFDAVKALLNSVLIP
SLEESLLHEDHILAALTNALESSKSKDGDKKHLSHSTRLAIFKFLSSHVVGTPLIAVKLR
LLQTLNQIKSISGTSRTDLLLPLLQWWARLSEEAAQQLLAREAVDEALVNNAFVDVVVAN
NEAGLKLIFELINDAKVVTRNGLVQSLFGRIQKIWSSMKAETQFSTARALLTLSQGVHAT
ASEPNAVATEATDVLHKVELTTDILLDFLESLYDDIKKATEKPATKRRRVGSSEKSVDTQ
SPADVSASLNKATFVLELVQESKPEQHPELLPSLFTTLSELQHLRTVVGSELGYLQSLVL
GSLLAMIPAYKDSKELTIDPAAGHGDILASCIQRSSSPTVINAALLLVASLARTAPDVVL
HSVMPIFTFMGSSVLKQADDYSAHVVNQTVKEVIPPLIETFRKSRRNLVASTAELLTSFV
VAYEHIPSHRKQDLFITLIENLGPEDFLFAVLAMFVDKYGATDNMIAFTTQIIGSFSVEI
QLQTLIKHLDIISDIFKPKPVLSVALLAKVDSNSAQDVVKLAQKQLTLLPKLLANRRLKH
EISALAEKDDMESVKIRELYAQFLEGILTLSGTVKPKSDKLYDLCGDALSNHLNLLSIAE
FIKSVEALLDRPNVVLRQKVLRALELRVDNESTNNLKSREALLAFLPQLTAVIRESDDMS
YKHTAVNCVDKIAEKYGKKDLDAVAAAAATIAGDSCLGQPSRELRIMALLCLASLVDVLQ
DAIVPVLPIAIPKALGCLEQSIKAEKPDGALHNAAYAFKAALAQHIPYMISGAYLDRLLA
CSNASAAAGLDEECRANRADCLQFVAKLIEGKVLFTALEKNWANAAASGYSALEEYLHVL
GTALDKHPKSSIAKNTTLFTGIFLNAFDLRRSGVLSSTQELEKIELLINETSLKMIYKLN
DAAFRPMFSHLMDWSTTGLPKSDLAGKAQRQVSTYGFLQHFFENLKSIVTSYAAYIIDSA
VKVLSAPFTSDDVFKTLRSRVLRTLTKCFEHDQDGFWQAPAHFSAVAPVLVEQFGHAANA
NNCTEDLVLAVVELAAAADSKEHHKEINSALLKHLRSEQAAVRLAVIKCQQALTTRLGEE
WLQSLPEMLPFISELQDDDDEVVERENRRWIVGIEETLGESLDNMLQ
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcattggcctcccagttggcccagatcgccgccaactcgcggtcgaccctcaac
accaaggtcctcaaggccgcccactccaagtccttgatcttcgagccccgcgtcgccgcc
acccagacataccccgagatctactcgatatgcctcgaaggctttgaagagctatgcaat
cttgattcacgcttcgccaagtttgcccagtcgctatggagcgagcagagccaggaggcc
gacaggacacagatgaccgctgctgagaacgctgccctcgataagcatgttgaggccttc
ctccacctctgtggcagcaggttgcgtctcatgcccaccatcaaggccattgagtggttg
attcgccggttccgcatccacgagttcaacaccgctgccctcatcgctaccttcctccca
taccacaccatcccggccttcgtgactttgctgtccatcctgcctgccaacatccctaag
gagtaccgcttcctcgacccctacatccgctctctgaccgcgccccctcgcgccgccatt
gtccagcaagcgacgaaccgccccgagcttcttaccgccatctcccagtataccctcgac
tcttgcaagtaccagatggagtaccccggtctcatctcgttctggggtggtgtcatggtc
gaggccaccaacggtctgctcgacaagtaccgttccggcaggagaagcatccagatcgag
aacgacaacgccctcatgcagcagcttgcccctgttctcagcgatgccatggtcatgaag
agctcccctggtctccagattgccagctacatggtggtcacaattcttgctgccaagggc
ggtcttgctgacaatgctcttacggccttcatggaccagcttgtccatggctggactccc
gagacgatgcgccctggtctcgtcaccctctgcatcatctcccagcaccgctccgccaag
cagctttctgccagagtcaccaaggctctcctcaaggttcccgagcttgcctccgttatg
aaccagattggaaaggaccacagagtcgataagctggccaacggccttgctcttgccttg
gtcgacaggcttcacaagaagggcgatgttcgcagtctgcctgtggtcaactcgctactt
cttggcaacgttctccgtgaaaagcagatcaaggtcgtctacaagtctctattggttgct
gcccacagaatcaacgatcaggttgatcaggatggcgcgattcgcaaggagcttggcacc
attctggttagcttgtcccaggctggtggcgaggttggtgatatcgtccgtgccaccatc
gaggaggttgacttcgacattgatgctcttgagttgactcttggcgcgtctattcgcccc
aagctcgccgttgaggatgcgcccgaggccgctgctgaggacaccactcccaaggtggac
aaggaagcggaactcgcgcagaacttcgagaagctctccaagctcaagccccagtctgct
tcgtgcttcgccgaggagcctcttgatcttctcgaggagctctactcgctctttttgtcc
gttgctgccaacgagactaacctccagaagttcgatgaggcccccgttctcagccacccc
caggctcctaccaggctcttctatgccagcttctacatgcgtctctggtgcggctctctc
cccactttggccaaggttgccgctcttgagcgcgtcaagaatctcctgaaggacgatgag
ttctccaagttggacttccaggccgtcgttccctatgccattgttgctcttagcgacccc
gccaagaaggtccgtcgggccgctgctgagctgatcactgttctcggatctttctaccag
accaagcccagcaaggtccgccgtgtttggggctctgagggcctctataccaagactgct
cctgtcagctggctggactttgatgccgtcaaggcccttctcaactccgtcctcattcct
tctctggaggagtccctccttcatgaggaccacatcttggctgccctcaccaacgctttg
gagagctccaagtccaaggatggtgacaagaaacacttgtcccactctaccagactcgct
atcttcaagttcctttccagccatgttgtcggaacaccgcttattgctgtcaagctgagg
ctcctccagacgctcaaccagatcaagagcatctctggtacctccagaaccgacctgctc
ctccctctattgcaatggtgggcccgcttgtccgaggaggcggctcagcagctccttgcc
cgggaagctgttgatgaggccttggtcaacaacgctttcgtcgatgtcgtcgttgccaac
aacgaggctggtctcaagctgatctttgagctcatcaacgatgccaaggttgttacccgc
aacggcctcgtccagtcgctcttcggccgtatccagaagatctggtcttccatgaaggcc
gagacccagttctccaccgctcgcgcgctgcttaccctttctcagggcgttcacgctacc
gcctccgagccaaacgccgttgctaccgaggccactgacgttttgcacaaggttgagctg
actaccgatattcttcttgacttcctcgagtccctgtacgatgatatcaagaaggctacc
gagaagccggctaccaagcgtaggcgtgttggctcctctgagaagagcgtcgacacgcag
agccctgccgatgtcagcgccagcctcaataaagccaccttcgttctcgagcttgttcag
gagtctaagcctgagcagcatcctgagttgcttcccagcctcttcaccaccctttctgag
ctccagcacctccgtactgttgttggctctgagctgggttacctccagagcttggttctc
ggcagtctgcttgccatgatccctgcctacaaagacagcaaggagctcactattgacccc
gcggctggtcacggtgatatcctcgcctcctgcatccagcggtcttccagccccacggtc
attaacgctgccctgttgttggttgccagcctggctcgcactgcgcccgacgtcgtcttg
cacagcgttatgcccatcttcaccttcatgggaagctctgtcctcaagcaggctgatgac
tactccgctcacgttgtcaaccagaccgtcaaggaggtcattcctcctttgatcgagacc
ttccgcaagagcaggaggaacctggttgccagcaccgccgaacttctcaccagctttgtc
gttgcctacgagcacattccttctcaccgcaagcaggatctgttcatcactcttatcgag
aaccttggacccgaggacttcctcttcgctgtccttgccatgttcgtggacaagtatggt
gctactgacaacatgattgcgttcactacccaaatcatcggctccttctcggtggagatt
cagctacagaccctcatcaagcatttggatatcatcagcgacatcttcaagcccaaacct
gtcctctccgttgctttgctcgccaaggtcgattccaactctgcgcaggatgttgtgaag
cttgctcaaaagcagcttaccctcctcccgaagttgcttgccaaccgtcgtctgaaacac
gagatttccgcattggctgagaaggacgatatggagtcagtcaagatccgcgagctctat
gcccagttcctcgagggcatcctcacgctttctggcaccgtcaagcccaagagcgacaaa
ctttacgacctctgcggcgacgcgctctctaaccacctcaacctgctgtcgattgctgaa
ttcattaaaagtgttgaggctcttcttgatcgtcctaacgttgtcttgcgccagaaggtc
ctccgcgctttggaacttcgtgtggacaatgagagcaccaacaacctcaagtcgagggag
gctttgcttgctttcttgccccagctgacggctgtcattcgcgagtcggacgacatgagc
tacaagcacacggccgtcaactgcgttgacaagatcgccgagaagtatggcaagaaggat
ctcgatgccgtcgctgctgccgccgctaccatcgctggcgacagctgccttggccagccg
tctcgggagctccgcattatggctcttctctgccttgcttctctcgtggatgttctccag
gacgctattgtccctgttctgcccattgccatccccaaggctcttggctgcctcgagcag
agcatcaaggccgagaagcccgatggtgcgctgcataacgctgcctatgccttcaaggct
gctcttgcccagcacatcccttacatgatctcgggtgcctacctcgacagacttcttgcc
tgctccaacgcttctgctgccgctggtctggacgaggagtgccgcgccaaccgcgccgac
tgcctccagtttgttgccaagcttatcgagggcaaggtcctcttcactgccctggaaaag
aactgggccaacgctgccgcctctggatactctgctctcgaggagtacctccatgtcctc
ggcaccgctttggacaagcaccccaagtcctccatcgccaagaacaccaccctcttcacc
ggcatcttcctcaacgccttcgatctccgccgcagcggcgtcctctcttccactcaggag
ctggagaagatcgagctcctcatcaacgagacttctctcaagatgatctacaagctcaac
gatgccgccttccgccccatgttctcccatcttatggattggtccaccacgggtctgccc
aagtccgacctggccggcaaggcccagcgccaggtcagcacctacggcttcctgcagcac
ttcttcgagaacctcaagtccatcgtgacctcgtacgccgcgtacatcatcgactcggcc
gtcaaggtcctctccgccccctttaccagcgacgacgttttcaagaccctccgctcgcgc
gtcctccgcaccctcaccaagtgcttcgagcacgaccaggacggcttctggcaggcgcct
gcccacttcagcgccgtcgcccctgttctcgtcgagcagttcggccacgccgccaacgcc
aacaactgcaccgaggatctggtgctcgccgttgtcgagctggctgccgctgccgacagt
aaggagcaccacaaggagatcaactcggcgctgctcaagcatctccgctccgagcaagcg
gccgtccgcttggcggtcatcaagtgccagcaggcgctcacgaccagactgggcgaggag
tggctccagagcttgccggagatgttgccgttcattagcgagttgcaggatgacgatgat
gaggttgtggagagggagaacaggaggtggatcgtggggattgaggagacccttggtgag
agcttggataatatgttgcagtaa
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