Sordaria macrospora: 10801586
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Entry
10801586 CDS
T01610
Symbol
SMAC4_06506
Name
(RefSeq) uncharacterized protein
KO
K27407
RNA-binding protein VTS1
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10801586 (SMAC4_06506)
04131 Membrane trafficking [BR:
smp04131
]
10801586 (SMAC4_06506)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
10801586 (SMAC4_06506)
Membrane trafficking [BR:
smp04131
]
SNARE
SNARE associated proteins
Others
10801586 (SMAC4_06506)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
10801586
NCBI-ProteinID:
XP_003344305
UniProt:
F7VYF7
LinkDB
All DBs
Position
4:complement(join(1103586..1103611,1103670..1104989,1105058..1105574))
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AA seq
620 aa
AA seq
DB search
MLNMSNIMSNRNSTPEASNVSSLRPPSSRAIGSNHGLRASADVAALTGAQAAASRIRPSS
DFYGQPQSGQVQGGAELDPQDKLAQQWIADIDQYETTLEEMAAATLDQDFKDELSAIEQW
FRVLSEAERTAALYALLQQTTQVQIRFFIQVLQQMGKNHPMSGVLSPANFDKDPMSSRLS
DAMGKLEVGSARNSLARPSGGANKRHSGLDQSTINTMFPDAVAAIATEKAKFTQQTGNPP
PSNRNSLVDNRNSLAAPTVSGPKDDTNGQNPASPWGPSDASRPKSSTGQTPMGQFVQPPP
SAGGLRSPRPPQLSSNSNIQSTTLTAAEPQLTELPLLSPYTSSGNWASMVNTPMVPTFGQ
TQGNNADMVANATAMKLAALSTVNNRFALDDARRYRRARSNDGAPGQNHGQMPLSPGPQG
IPSTNVVMINEHGQVLSHDHVLALQQQQQHGLQQGLGGFGGHRSRPTSPGIAVPNYGPAL
QFTSPQNNGFLSAYDSGAPGLINNGLVPMMGQFNLGGHHAEGYLSDHSEINRGRSPRGRR
GSSKPPEDPTDPTLLQDIPSWLRSLRLHKYTDNLKDMKWTDLIELDDKQLEERGVNALGA
RRKMLKVFEQVKEAKNEGKI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatgtccaacattatgagcaaccgcaacagcacccccgaggctagcaatgtc
tcttcgctgaggcccccctcttctcgcgccattggctccaaccacggccttcgcgcctct
gccgatgtggccgcgcttaccggcgctcaggccgccgcaagccgcattcgcccgtcgtcc
gacttttacggccagccgcagtccggccaggtgcagggcggtgccgagctggacccccaa
gacaagctggcgcagcagtggattgccgacattgaccaatatgagaccactctcgaggag
atggctgccgctacgcttgatcaggacttcaaggatgaactcagcgctattgaacagtgg
ttccgcgtcctgagcgaagctgagcgcacagctgccctttatgctctgcttcagcagact
acccaggtccagatccgtttcttcatccaggtcctccagcagatgggcaagaaccacccc
atgtcgggagttctgtcccctgctaactttgacaaggatcccatgtcgagccgcttgagc
gatgctatgggcaagctggaagtcggatcggcccgtaactcgcttgcccgccccagtggc
ggcgccaacaagagacactcggggctggatcagagcacgatcaacaccatgttcccggat
gctgttgcggccattgctacggagaaggccaaattcactcagcaaacaggcaaccctccg
ccttcgaaccgtaacagcctggttgacaaccgcaactccctcgctgcccccacggtttcc
ggccccaaggatgacaccaatggacaaaacccggcctccccgtggggtcccagcgacgct
tctcggcccaagtcatccaccggccagactccgatgggccagtttgtgcaacccccgccg
tcggccggtggtttgcgttcccctcgtcctccgcagctgagcagtaactccaacattcag
agcacgacccttactgcggctgagccgcagctgactgagctcccgctgctatccccttac
acctctagtggtaactgggcctcgatggtcaacacacccatggttccaactttcggccaa
acgcaaggaaacaatgccgacatggtagccaacgcgacagccatgaagctggccgcactc
tcgacggtaaacaaccgctttgctttggacgacgcgcgccgctatcgccgtgctcgttcc
aacgatggagcacctggccagaatcacggtcagatgcccctctcgccggggcctcaggga
attccgagcaccaatgtggtcatgatcaacgagcacgggcaagtcttgagccacgaccat
gttttggcgcttcagcagcaacaacaacatggtctgcaacagggtcttggcggctttggt
ggccatcgttcacgccccacctcacccggtattgcggtgcccaactacggccccgcattg
cagtttacctcgccgcagaacaatggcttccttagcgcgtatgacagtggtgcacccggc
ttgatcaacaatggactggttccaatgatgggtcaatttaacctgggcggccaccacgca
gagggctatctttcggaccattccgagatcaaccgtggccgctctccgcgtggtcgcaga
ggcagctcgaagccgcctgaggatcctaccgaccctactctcctgcaggatatccctagc
tggctgcggagcctgcgtctgcacaagtacacagacaacttgaaggacatgaagtggacg
gatttgatcgagctagacgacaagcagctggaggagcgtggtgtcaatgctttgggcgct
agacgcaagatgctcaaggtctttgaacaagtcaaggaggctaaaaacgaaggcaagatc
tag
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