Sordaria macrospora: 10801829
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Entry
10801829 CDS
T01610
Symbol
SMAC4_07543
Name
(RefSeq) uncharacterized protein
KO
K18723
nucleoporin GLE1
Organism
smp
Sordaria macrospora
Pathway
smp03013
Nucleocytoplasmic transport
smp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
10801829 (SMAC4_07543)
03015 mRNA surveillance pathway
10801829 (SMAC4_07543)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10801829 (SMAC4_07543)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
10801829 (SMAC4_07543)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
10801829
NCBI-ProteinID:
XP_065946250
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Position
2:join(5086654..5087499,5087567..5088346)
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AA seq
541 aa
AA seq
DB search
MAGSSPARPNGNQWASPSSRSVISDILAGDRNSEARHRLLIEAARREHERVREEAERVYQ
EHLWRQEQERLIEERKKEEDRIRQEEQLAAERRKINALKAKKVEIPPVLPDPEPVKAPPP
APKPASTPTPSQPLATQLNGSSLFGKTPDTQAASASAAPKGFGAFGQTSTSAQPATAAPK
QTTPPIAASSSPAVNNLLGNSTQVNGVTAPATVAKPQAPAPAQQGPDRLTVIHKNLKLLR
KSMLDQAKANPALKSRMGDMRREIRKCVGQLTGGGAGVNRQQNNTIAALLREALENRVQS
QLVDPNTFLVEPRAPVQGPTNNDPQIPSLFIYLLNVFAKATISQFINEGGPRPETTDPVG
VCIAAIFSDPAFAWRGASLIDILFAKFRVVCPVLWGYRGSEKTEQGRARIGWWKENGRWV
TEQAHFDRMTGLGAGFAAISLRNFGSSKKQNPYPPRHYWAAMAKIINTPSAEISNTQCVV
LKAMIQNYEEKFIHAYGTAALAALRTALVEFPARAPVKSSAVNSLQVVYDLLRKSTGLVL
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctggctcgtcccccgctcgcccaaacggcaaccagtgggcaagcccttcttcacga
tcagtcatatccgacattctcgctggcgaccgcaattccgaggctcgacacagacttctg
attgaggcagcaaggagggaacatgaacgtgtgcgcgaggaggccgaaagggtataccag
gaacacctgtggagacaagagcaggaacgcctgatcgaggaacggaagaaagaggaggac
aggatacggcaagaagaacagcttgctgctgagcgaaggaagatcaatgctctcaaggca
aagaaggtcgaaatcccgcccgttttgcccgaccccgaaccagtaaaggcaccacctcca
gccccgaagcctgcctcaacgccaactccgtcacaaccactcgcgactcaactcaatggc
agttcgctcttcggaaagacacccgatacacaggctgcgtctgcatcagctgcgccgaag
gggtttggagcgtttggacagacatcaacaagtgcgcaacccgccactgctgccccgaag
caaacaacgcctccaattgcagcctcctcttcacctgcggtcaacaacttgctaggaaac
agtacccaggtcaatggagtcacggcgcccgcgaccgttgctaaaccacaggcaccagcg
cccgcgcagcaaggacccgaccgcttgacagttattcacaaaaacctaaaactgctgcgc
aagtcaatgttggaccaagcaaaagcgaatccggcgctcaagtctcgcatgggagatatg
cgccgagagatcaggaagtgtgttggacaactcacgggaggcggcgcaggagttaaccgt
caacagaacaataccatcgctgctctgctacgcgaggcgctcgaaaaccgcgtgcagtct
cagctcgttgacccgaatactttcctcgtcgaaccacgagcgccggtccaaggacctacc
aacaacgatccgcagatcccgtcactctttatctacctactgaacgttttcgccaaggcg
accatctctcagttcatcaacgaaggcggcccgcgcccggagacaaccgatcccgtgggc
gtatgtatcgccgccatattttccgatccggccttcgcgtggcgcggggcctccttgatc
gacatccttttcgccaaatttcgtgtcgtctgtcccgtgctctggggctacagaggcagc
gaaaagacagagcaaggacgcgccaggataggatggtggaaagagaacggaagatgggtt
acggaacaggcacattttgaccgcatgacgggtctcggtgccggctttgccgcaatatcg
ttgcgaaactttggctcgtccaagaagcagaacccatacccaccacgtcattactgggcg
gccatggcgaagatcatcaacaccccttcagcagagatatccaacacccagtgtgtggtt
ctgaaagctatgatccagaactacgaggaaaagtttatccacgcgtatgggaccgctgct
cttgcggcgttaaggacagcgcttgtcgagttccctgctcgggcgccggtcaagtccagt
gctgttaattcgttacaggttgtctatgacctgctcaggaagagtactggacttgttctt
ggataa
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